RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SSX2IPQ9Y2D8 614 aa15.03■□□□□ -0
SPG11-202ENST00000427534 GOLGA6L7A0A1B0GV03 622 aa15.03■□□□□ -0
SPG11-202ENST00000427534 MCM5P33992 734 aa15.03■□□□□ -0
SPG11-202ENST00000427534 TPTE2Q6XPS3 522 aa15.03■□□□□ -0
SPG11-202ENST00000427534 RHPN1Q8TCX5 695 aa15.03■□□□□ -0
SPG11-202ENST00000427534 ASIC1P78348 528 aa15.03■□□□□ -0
SPG11-202ENST00000427534 GRIPAP1Q4V328 841 aa15.03■□□□□ -0
SPG11-202ENST00000427534 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
SPG11-202ENST00000427534 ESPNB1AK53 854 aa15.02■□□□□ -0
SPG11-202ENST00000427534 SPOUT1Q5T280 376 aaKnown RBP15.02■□□□□ -0
SPG11-202ENST00000427534 ATP10BO94823 1461 aa15.02■□□□□ -0
SPG11-202ENST00000427534 MAPKBP1O60336 1514 aa15.02■□□□□ -0
SPG11-202ENST00000427534 USO1O60763 962 aaKnown RBP15.02■□□□□ -0
SPG11-202ENST00000427534 TNPO1Q92973 898 aaKnown RBP15.02■□□□□ -0
SPG11-202ENST00000427534 LDHBP07195 334 aaKnown RBP15.02□□□□□ -0.01
SPG11-202ENST00000427534 TTC22Q5TAA0 569 aa15.02□□□□□ -0.01
SPG11-202ENST00000427534 GSTA5Q7RTV2 222 aa15.02□□□□□ -0.01
SPG11-202ENST00000427534 ARHGAP45Q92619 1136 aa15.02□□□□□ -0.01
SPG11-202ENST00000427534 PTPDC1A2A3K4 754 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 KRT13P13646 458 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 RFX1P22670 979 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 STK32BQ9NY57 414 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 PPP1R14CQ8TAE6 165 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 CEP63Q96MT8 703 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 BICC1Q9H694 974 aaKnown RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 EIF4A2Q14240 407 aaKnown RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 CPXCR1Q8N123 301 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 UQCRFS1P1P0C7P4 283 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 KRT9P35527 623 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 MRRFQ96E11 262 aaKnown RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 RBM8AQ9Y5S9 174 aaKnown RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 GRM8O00222 908 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 N4BP3O15049 544 aa15.01□□□□□ -0.01
SPG11-202ENST00000427534 DCAF17Q5H9S7 520 aaPredicted RBP15.01□□□□□ -0.01
SPG11-202ENST00000427534 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
SPG11-202ENST00000427534 RAPGEF6Q8TEU7 1601 aa15□□□□□ -0.01
SPG11-202ENST00000427534 FAM13AO94988 1023 aa15□□□□□ -0.01
SPG11-202ENST00000427534 CPA1P15085 419 aa15□□□□□ -0.01
SPG11-202ENST00000427534 CCDC63Q8NA47 563 aa15□□□□□ -0.01
SPG11-202ENST00000427534 ESR2Q92731 530 aa15□□□□□ -0.01
SPG11-202ENST00000427534 NUP160Q12769 1436 aa15□□□□□ -0.01
SPG11-202ENST00000427534 HDAC1Q13547 482 aaPredicted RBP15□□□□□ -0.01
SPG11-202ENST00000427534 CNBD1Q8NA66 436 aa15□□□□□ -0.01
SPG11-202ENST00000427534 TBC1D5Q92609 795 aa15□□□□□ -0.01
SPG11-202ENST00000427534 PICK1Q9NRD5 415 aa15□□□□□ -0.01
SPG11-202ENST00000427534 DUOX2Q9NRD8 1548 aa15□□□□□ -0.01
SPG11-202ENST00000427534 CAPZA3Q96KX2 299 aa15□□□□□ -0.01
SPG11-202ENST00000427534 NYXQ9GZU5 481 aa15□□□□□ -0.01
SPG11-202ENST00000427534 ASXL1Q8IXJ9 1541 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 IRX5P78411 483 aaPredicted RBP14.99□□□□□ -0.01
SPG11-202ENST00000427534 RRP36Q96EU6 259 aaKnown RBP14.99□□□□□ -0.01
SPG11-202ENST00000427534 KRT5P13647 590 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 SYKP43405 635 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 RAD51AP2Q09MP3 1159 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 PRAG1Q86YV5 1406 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
SPG11-202ENST00000427534 SDSP20132 328 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 PAFAH1B1P43034 410 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 BEGAINQ9BUH8 593 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 STXBP4Q6ZWJ1 553 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 ARMT1Q9H993 441 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 AATFQ9NY61 560 aaKnown RBP eCLIP14.99□□□□□ -0.01
SPG11-202ENST00000427534 PRDM1O75626 825 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 TSPYL6Q8N831 410 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 PLCB3Q01970 1234 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 NUCB1Q02818 461 aa14.99□□□□□ -0.01
SPG11-202ENST00000427534 MKRN3Q13064 507 aaKnown RBP14.99□□□□□ -0.01
SPG11-202ENST00000427534 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 hCG_1642624A0A1W2PR95 340 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 RASA3Q14644 834 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
SPG11-202ENST00000427534 PPP2R5DQ14738 602 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 KRT23Q9C075 422 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 ADCY5O95622 1261 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 STAMBPO95630 424 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 LARGE2Q8N3Y3 721 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 PPP2R5CQ13362 524 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 TSNARE1Q96NA8 513 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 ZSCAN30Q86W11 494 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 TBC1D32Q96NH3 1257 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 ALS2CR12Q96Q35 445 aa14.98□□□□□ -0.01
SPG11-202ENST00000427534 A0A1W2PRG0 241 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 CNGA1P29973 690 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
SPG11-202ENST00000427534 CCDC169A6NNP5 214 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 ZNF174Q15697 407 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 C6orf50Q9HD87 102 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 MCMDC2Q4G0Z9 681 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 SPAG5Q96R06 1193 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 NCBP1Q09161 790 aaKnown RBP14.97□□□□□ -0.01
SPG11-202ENST00000427534 TBC1D7Q9P0N9 293 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 PARD3Q8TEW0 1356 aa14.97□□□□□ -0.01
SPG11-202ENST00000427534 TIMM10P62072 90 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms