RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 IGHMBP2P38935 993 aaKnown RBP20.26■□□□□ 0.83
HLA-DQB2-230ENST00000427449 TBC1D10BQ4KMP7 808 aaPredicted RBP20.26■□□□□ 0.83
HLA-DQB2-230ENST00000427449 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
HLA-DQB2-230ENST00000427449 PODNQ7Z5L7 613 aa20.26■□□□□ 0.83
HLA-DQB2-230ENST00000427449 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
HLA-DQB2-230ENST00000427449 MIER1Q8N108 512 aa20.25■□□□□ 0.83
HLA-DQB2-230ENST00000427449 AGBL3Q8NEM8 1001 aa20.25■□□□□ 0.83
HLA-DQB2-230ENST00000427449 USP44Q9H0E7 712 aa20.25■□□□□ 0.83
HLA-DQB2-230ENST00000427449 TLL2Q9Y6L7 1015 aa20.25■□□□□ 0.83
HLA-DQB2-230ENST00000427449 TAF5LO75529 589 aa20.24■□□□□ 0.83
HLA-DQB2-230ENST00000427449 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
HLA-DQB2-230ENST00000427449 BICC1Q9H694 974 aaKnown RBP20.24■□□□□ 0.83
HLA-DQB2-230ENST00000427449 USP17L3A6NCW0 530 aa20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 USP17L4A6NCW7 530 aa20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 IFIT5Q13325 482 aaKnown RBP20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 USP17L1Q7RTZ2 530 aa20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 PUS3Q9BZE2 481 aaKnown RBP20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 ANKRD2Q9GZV1 360 aa20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 COA1Q9GZY4 146 aa20.23■□□□□ 0.83
HLA-DQB2-230ENST00000427449 H7C1D1 291 aa20.22■□□□□ 0.83
HLA-DQB2-230ENST00000427449 SAPCD2Q86UD0 394 aa20.22■□□□□ 0.83
HLA-DQB2-230ENST00000427449 CERS5Q8N5B7 392 aa20.22■□□□□ 0.83
HLA-DQB2-230ENST00000427449 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
HLA-DQB2-230ENST00000427449 OTOFQ9HC10 1997 aa20.22■□□□□ 0.83
HLA-DQB2-230ENST00000427449 ADM5C9JUS6 153 aa20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 RFX5P48382 616 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 COL13A1Q5TAT6 717 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 ZBED3Q96IU2 234 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 MPHOSPH8Q99549 860 aa20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 GGA3Q9NZ52 723 aa20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 C9orf78Q9NZ63 289 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 RIPOR2Q9Y4F9 1068 aa20.21■□□□□ 0.83
HLA-DQB2-230ENST00000427449 RARSP54136 660 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB2-230ENST00000427449 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CD209Q9NNX6 404 aa20.2■□□□□ 0.82
HLA-DQB2-230ENST00000427449 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
HLA-DQB2-230ENST00000427449 IL1R1P14778 569 aa20.19■□□□□ 0.82
HLA-DQB2-230ENST00000427449 DEFB115Q30KQ5 88 aa20.19■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CDC37L1Q7L3B6 337 aa20.19■□□□□ 0.82
HLA-DQB2-230ENST00000427449 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
HLA-DQB2-230ENST00000427449 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB2-230ENST00000427449 FOXN1O15353 648 aa20.18■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
HLA-DQB2-230ENST00000427449 MYOZ2Q9NPC6 264 aa20.18■□□□□ 0.82
HLA-DQB2-230ENST00000427449 WBP1LQ9NX94 342 aa20.18■□□□□ 0.82
HLA-DQB2-230ENST00000427449 SSC5DA1L4H1 1573 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 USP17L8P0C7I0 530 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 HHIPL1Q96JK4 782 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 AOX1Q06278 1338 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 COL1A1P02452 1464 aaPredicted RBP20.17■□□□□ 0.82
HLA-DQB2-230ENST00000427449 NBPF9Q3BBW0 867 aa20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 RBM26Q5T8P6 1007 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 LDHAL6AQ6ZMR3 332 aa20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 CAPNS2Q96L46 248 aa20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 ABT1Q9ULW3 272 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB2-230ENST00000427449 SCARF1Q14162 830 aa20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 IFFO2Q5TF58 517 aa20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 PCDHAC2Q9Y5I4 1007 aa20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
HLA-DQB2-230ENST00000427449 FAM155AB1AL88 458 aaPredicted RBP20.14■□□□□ 0.81
HLA-DQB2-230ENST00000427449 WNT10BO00744 389 aa20.14■□□□□ 0.81
HLA-DQB2-230ENST00000427449 GTF2IP78347 998 aa20.14■□□□□ 0.81
HLA-DQB2-230ENST00000427449 SCAF8Q9UPN6 1271 aaKnown RBP20.14■□□□□ 0.81
HLA-DQB2-230ENST00000427449 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.81
HLA-DQB2-230ENST00000427449 FAM205AQ6ZU69 1335 aa20.13■□□□□ 0.81
HLA-DQB2-230ENST00000427449 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
HLA-DQB2-230ENST00000427449 CDCA5Q96FF9 252 aa20.13■□□□□ 0.81
HLA-DQB2-230ENST00000427449 ZIC5Q96T25 663 aa20.13■□□□□ 0.81
HLA-DQB2-230ENST00000427449 G3V3G9 751 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 AOC2O75106 756 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 FGFR2P21802 821 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 PTPN12Q05209 780 aaKnown RBP20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 DCAF8Q5TAQ9 597 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 ATG9AQ7Z3C6 839 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 TDRD7Q8NHU6 1098 aaKnown RBP20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 FAM84BQ96KN1 310 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
HLA-DQB2-230ENST00000427449 SASH1O94885 1247 aa20.11■□□□□ 0.81
HLA-DQB2-230ENST00000427449 FKBP1AP62942 108 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB2-230ENST00000427449 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
HLA-DQB2-230ENST00000427449 MEIS3Q99687 375 aa20.11■□□□□ 0.81
HLA-DQB2-230ENST00000427449 MROH5Q6ZUA9 1318 aa20.1■□□□□ 0.81
HLA-DQB2-230ENST00000427449 GYG1P46976 350 aa20.1■□□□□ 0.81
HLA-DQB2-230ENST00000427449 GRIK5Q16478 980 aa20.1■□□□□ 0.81
HLA-DQB2-230ENST00000427449 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB2-230ENST00000427449 DCPSQ96C86 337 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms