RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 C17orf53Q8N3J3 647 aaPredicted RBP13.74□□□□□ -0.21
FIRRE-201ENST00000427391 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 PGBD1Q96JS3 809 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 NSUN7Q8NE18 718 aaKnown RBP13.74□□□□□ -0.21
FIRRE-201ENST00000427391 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
FIRRE-201ENST00000427391 LAMA4Q16363 1823 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 CIAO1O76071 339 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 RESTQ13127 1097 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 PUS7LQ9H0K6 701 aaKnown RBP13.73□□□□□ -0.21
FIRRE-201ENST00000427391 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
FIRRE-201ENST00000427391 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 SNAP23O00161 211 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 OFD1O75665 1012 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 IFIT5Q13325 482 aaKnown RBP13.73□□□□□ -0.21
FIRRE-201ENST00000427391 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
FIRRE-201ENST00000427391 R3HCC1Q9Y3T6 440 aaKnown RBP13.73□□□□□ -0.21
FIRRE-201ENST00000427391 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 NR1I2O75469 434 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
FIRRE-201ENST00000427391 EXOSC10Q01780 885 aaKnown RBP13.72□□□□□ -0.21
FIRRE-201ENST00000427391 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 HELBQ8NG08 1087 aaPredicted RBP13.72□□□□□ -0.21
FIRRE-201ENST00000427391 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 PFKFB2O60825 505 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 ITGA6P23229 1130 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
FIRRE-201ENST00000427391 LDHAL6AQ6ZMR3 332 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
FIRRE-201ENST00000427391 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
FIRRE-201ENST00000427391 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
FIRRE-201ENST00000427391 STARD3NLO95772 234 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
FIRRE-201ENST00000427391 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.22
FIRRE-201ENST00000427391 MCAMP43121 646 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 SPC24Q8NBT2 197 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 A0A087WWV3 80 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 KDM4AO75164 1064 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 FGAP02671 866 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 CSF1RP07333 972 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 EP400Q96L91 3159 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 RIC1Q4ADV7 1423 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
FIRRE-201ENST00000427391 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 ELP1O95163 1332 aa13.7□□□□□ -0.22
FIRRE-201ENST00000427391 CYP19A1P11511 503 aaPredicted RBP13.69□□□□□ -0.22
FIRRE-201ENST00000427391 TYRO3Q06418 890 aa13.69□□□□□ -0.22
FIRRE-201ENST00000427391 TRIM28Q13263 835 aaKnown RBP13.69□□□□□ -0.22
FIRRE-201ENST00000427391 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
FIRRE-201ENST00000427391 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
FIRRE-201ENST00000427391 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
FIRRE-201ENST00000427391 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
FIRRE-201ENST00000427391 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
FIRRE-201ENST00000427391 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
FIRRE-201ENST00000427391 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
FIRRE-201ENST00000427391 AKAP2Q9Y2D5 859 aa13.68□□□□□ -0.22
FIRRE-201ENST00000427391 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
FIRRE-201ENST00000427391 CTSWP56202 376 aa13.68□□□□□ -0.22
FIRRE-201ENST00000427391 ANO6Q4KMQ2 910 aa13.68□□□□□ -0.22
FIRRE-201ENST00000427391 GPAA1O43292 621 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 PHKA1P46020 1223 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 USP28Q96RU2 1077 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 IDH1O75874 414 aaKnown RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
FIRRE-201ENST00000427391 ANTXR2P58335 489 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 ACSBG1Q96GR2 724 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
FIRRE-201ENST00000427391 INCENPQ9NQS7 918 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms