RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 TTC39AQ5SRH9 613 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
CTCFL-206ENST00000426658 TOM1O60784 492 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 IFIT1P09914 478 aaKnown RBP11.87□□□□□ -0.51
CTCFL-206ENST00000426658 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CTCFL-206ENST00000426658 TFCP2Q12800 502 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 IQCB1Q15051 598 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 ANKRD24Q8TF21 1146 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTCFL-206ENST00000426658 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-206ENST00000426658 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
CTCFL-206ENST00000426658 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 HOXB7P09629 217 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 LINS1Q8NG48 757 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 IMPACTQ9P2X3 320 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 RBM43Q6ZSC3 357 aaKnown RBP11.86□□□□□ -0.51
CTCFL-206ENST00000426658 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 C8orf76Q96K31 380 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 TPM1P09493 284 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 LMOD1P29536 600 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-206ENST00000426658 TIMM10P62072 90 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 KCNB2Q92953 911 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 XPO4Q9C0E2 1151 aaKnown RBP11.86□□□□□ -0.51
CTCFL-206ENST00000426658 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.86□□□□□ -0.511e-7■■□□□ 12.2
CTCFL-206ENST00000426658 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 CBFA2T2O43439 604 aa11.86□□□□□ -0.51
CTCFL-206ENST00000426658 IDH1O75874 414 aaKnown RBP11.86□□□□□ -0.51
CTCFL-206ENST00000426658 NAA16Q6N069 864 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-206ENST00000426658 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-206ENST00000426658 TAF5LO75529 589 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 TUBB4AP04350 444 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-206ENST00000426658 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
CTCFL-206ENST00000426658 ZBTB22O15209 634 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 MCMDC2Q4G0Z9 681 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 ST7Q9NRC1 585 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 RCOR1Q9UKL0 485 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 CCZ1BP86790 482 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 CCZ1P86791 482 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-206ENST00000426658 SCRN1Q12765 414 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 ATL3Q6DD88 541 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 DHX32Q7L7V1 743 aaKnown RBP11.85□□□□□ -0.51
CTCFL-206ENST00000426658 PPP1R13BQ96KQ4 1090 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
CTCFL-206ENST00000426658 ZSCAN12O43309 604 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 RXRAP19793 462 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 LRRFIP1Q32MZ4 808 aaKnown RBP11.84□□□□□ -0.51
CTCFL-206ENST00000426658 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 SASH1O94885 1247 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
CTCFL-206ENST00000426658 MTX1Q13505 466 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 CCDC57Q2TAC2 916 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-206ENST00000426658 DHX16O60231 1041 aaKnown RBP11.84□□□□□ -0.51
CTCFL-206ENST00000426658 AK7Q96M32 723 aa11.84□□□□□ -0.51
CTCFL-206ENST00000426658 CWC15Q9P013 229 aaKnown RBP11.84□□□□□ -0.51
CTCFL-206ENST00000426658 SETD1BQ9UPS6 1966 aaKnown RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 TSPYL1Q9H0U9 437 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 KDRP35968 1356 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 CLCN6P51797 869 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 UBASH3AP57075 661 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 SRRTQ9BXP5 876 aaKnown RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 USP31Q70CQ4 1352 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 MICU3Q86XE3 530 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 DHX40Q8IX18 779 aaKnown RBP11.83□□□□□ -0.52
CTCFL-206ENST00000426658 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
CTCFL-206ENST00000426658 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
CTCFL-206ENST00000426658 CASQ1P31415 396 aa11.82□□□□□ -0.52
CTCFL-206ENST00000426658 FAM193AP78312 1265 aa11.82□□□□□ -0.52
CTCFL-206ENST00000426658 TXLNBQ8N3L3 684 aa11.82□□□□□ -0.52
CTCFL-206ENST00000426658 NUP133Q8WUM0 1156 aa11.82□□□□□ -0.52
CTCFL-206ENST00000426658 CARD6Q9BX69 1037 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms