RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 JCADQ9P266 1359 aa15.79■□□□□ 0.12
USP42-203ENST00000426246 EXOC5O00471 708 aa15.79■□□□□ 0.12
USP42-203ENST00000426246 SASH1O94885 1247 aa15.79■□□□□ 0.12
USP42-203ENST00000426246 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
USP42-203ENST00000426246 PSMA5P28066 241 aa15.79■□□□□ 0.12
USP42-203ENST00000426246 A1BGP04217 495 aa15.78■□□□□ 0.12
USP42-203ENST00000426246 GJB4Q9NTQ9 266 aa15.78■□□□□ 0.12
USP42-203ENST00000426246 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
USP42-203ENST00000426246 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
USP42-203ENST00000426246 ZNF165P49910 485 aa15.77■□□□□ 0.12
USP42-203ENST00000426246 NAA30Q147X3 362 aaPredicted RBP15.77■□□□□ 0.12
USP42-203ENST00000426246 RREB1Q92766 1687 aa15.77■□□□□ 0.12
USP42-203ENST00000426246 GOLGA6L6A8MZA4 724 aa15.77■□□□□ 0.12
USP42-203ENST00000426246 GCKRQ14397 625 aa15.77■□□□□ 0.12
USP42-203ENST00000426246 GPHNQ9NQX3 736 aaPredicted RBP15.77■□□□□ 0.12
USP42-203ENST00000426246 STAP2Q9UGK3 403 aa15.77■□□□□ 0.12
USP42-203ENST00000426246 NR1I2O75469 434 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 GPTP24298 496 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 TYRO3Q06418 890 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 PPP4R3BQ5MIZ7 849 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 TTLL5Q6EMB2 1281 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.11
USP42-203ENST00000426246 EP400Q96L91 3159 aa15.77■□□□□ 0.11
USP42-203ENST00000426246 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 THSD7AQ9UPZ6 1657 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 COL15A1P39059 1388 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 ARID5BQ14865 1188 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 VPS53Q5VIR6 699 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 CASP7P55210 303 aa15.76■□□□□ 0.11
USP42-203ENST00000426246 CPLX1O14810 134 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 NEK1Q96PY6 1258 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
USP42-203ENST00000426246 AP5Z1O43299 807 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 TCHHQ07283 1943 aa15.75■□□□□ 0.11
USP42-203ENST00000426246 SMC2O95347 1197 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 DDB1Q16531 1140 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 RRP12Q5JTH9 1297 aaKnown RBP15.74■□□□□ 0.11
USP42-203ENST00000426246 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 CERKQ8TCT0 537 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 PDLIM2Q96JY6 352 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 CLIP2Q9UDT6 1046 aa15.74■□□□□ 0.11
USP42-203ENST00000426246 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
USP42-203ENST00000426246 RPAP1Q9BWH6 1393 aaPredicted RBP15.73■□□□□ 0.11
USP42-203ENST00000426246 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
USP42-203ENST00000426246 ANKRD36CQ5JPF3 1778 aa15.73■□□□□ 0.11
USP42-203ENST00000426246 COL5A3P25940 1745 aaPredicted RBP15.73■□□□□ 0.11
USP42-203ENST00000426246 CLEC17AQ6ZS10 378 aa15.73■□□□□ 0.11
USP42-203ENST00000426246 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 PDCP20941 246 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 VPS72Q15906 364 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 RIOK3O14730 519 aaKnown RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 PI16Q6UXB8 463 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 TTC14Q96N46 770 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 CBX8Q9HC52 389 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 A0A1B0GVL5 298 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP42-203ENST00000426246 CCAR2Q8N163 923 aaKnown RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 PIBF1Q8WXW3 757 aa15.72■□□□□ 0.11
USP42-203ENST00000426246 SH2B1Q9NRF2 756 aaPredicted RBP15.72■□□□□ 0.11
USP42-203ENST00000426246 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.11
USP42-203ENST00000426246 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 CYP19A1P11511 503 aaPredicted RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 MARCKSP29966 332 aaPredicted RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 CCAR1Q8IX12 1150 aaKnown RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 MTMR7Q9Y216 660 aa15.71■□□□□ 0.11
USP42-203ENST00000426246 MYH14Q7Z406 1995 aaKnown RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.11
USP42-203ENST00000426246 C8orf37Q96NL8 207 aa15.71■□□□□ 0.11
USP42-203ENST00000426246 TNNT1P13805 278 aa15.7■□□□□ 0.1
USP42-203ENST00000426246 RABL6Q3YEC7 729 aaPredicted RBP15.7■□□□□ 0.1
USP42-203ENST00000426246 NUP98P52948 1817 aa15.7■□□□□ 0.1
USP42-203ENST00000426246 IFIT1P09914 478 aaKnown RBP15.7■□□□□ 0.1
USP42-203ENST00000426246 STK38Q15208 465 aa15.7■□□□□ 0.1
USP42-203ENST00000426246 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
USP42-203ENST00000426246 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
USP42-203ENST00000426246 LEO1Q8WVC0 666 aaPredicted RBP15.7■□□□□ 0.1
USP42-203ENST00000426246 TEX13AQ9BXU3 409 aaPredicted RBP15.7■□□□□ 0.1
USP42-203ENST00000426246 PDCL2Q8N4E4 241 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 ZSWIM6Q9HCJ5 1215 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
USP42-203ENST00000426246 RPS6KB1P23443 525 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 HOMER1Q86YM7 354 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 PUS3Q9BZE2 481 aaKnown RBP15.69■□□□□ 0.1
USP42-203ENST00000426246 HDAC5Q9UQL6 1122 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 A0A0U1RQG5 324 aaPredicted RBP15.69■□□□□ 0.1
USP42-203ENST00000426246 H7C1W4 665 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 RFX5P48382 616 aaPredicted RBP15.69■□□□□ 0.1
USP42-203ENST00000426246 SLC4A8Q2Y0W8 1093 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 LRRC24Q50LG9 513 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 FAM200AQ8TCP9 573 aa15.69■□□□□ 0.1
USP42-203ENST00000426246 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
USP42-203ENST00000426246 ST3GAL1Q11201 340 aa15.68■□□□□ 0.1
USP42-203ENST00000426246 NECTIN1Q15223 517 aa15.68■□□□□ 0.1
USP42-203ENST00000426246 NFXL1Q6ZNB6 911 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms