RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 ANKRD31Q8N7Z5 1873 aa8.91□□□□□ -0.98
CHCHD3P1-201ENST00000425516 PDE8AO60658 829 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 CSF1RP07333 972 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 PDE6BP35913 854 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 ST5P78524 1137 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 FOXO4P98177 505 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 SF3B3Q15393 1217 aaKnown RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 EPHA10Q5JZY3 1008 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 UBE3BQ7Z3V4 1068 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 FTSJ3Q8IY81 847 aaKnown RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 SUCLG2Q96I99 432 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 MEIS3Q99687 375 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 SYT17Q9BSW7 474 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 C9orf78Q9NZ63 289 aaPredicted RBP8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 TSKSQ9UJT2 592 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 KIAA1551Q9HCM1 1747 aa8.9□□□□□ -0.98
CHCHD3P1-201ENST00000425516 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 A0A0G2JLW4 131 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 SRGNP10124 158 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 DPEP1P16444 411 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 MVPQ14764 893 aaKnown RBP8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 NLGN2Q8NFZ4 835 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 TTLL11Q8NHH1 800 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 COG6Q9Y2V7 657 aa8.89□□□□□ -0.99
CHCHD3P1-201ENST00000425516 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 GNAI3P08754 354 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 NPR1P16066 1061 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CHRNA5P30532 468 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RABL6Q3YEC7 729 aaPredicted RBP8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 C2CD5Q86YS7 1000 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ITPRIPQ8IWB1 547 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ZBTB40Q9NUA8 1239 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 PPP1R1BQ9UD71 204 aaPredicted RBP8.88□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RTL9Q8NET4 1388 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 LAMB2P55268 1798 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 H0YIN7 160 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 NPHP1O15259 732 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 UBTFL1P0CB47 393 aaPredicted RBP8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CTSWP56202 376 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 STYK1Q6J9G0 422 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ANKRD44Q8N8A2 993 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 MASTLQ96GX5 879 aa8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 BICC1Q9H694 974 aaKnown RBP8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
CHCHD3P1-201ENST00000425516 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 TRIM6-TRIM34B2RNG4 842 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 GNAI2P04899 355 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 MTX1Q13505 466 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CCDC152Q4G0S7 254 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CRAMP1Q96RY5 1269 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 GREM2Q9H772 168 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 LRRFIP2Q9Y608 721 aaKnown RBP8.86□□□□□ -0.99
CHCHD3P1-201ENST00000425516 COL4A1P02462 1669 aa8.85□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CENPBP07199 599 aaPredicted RBP8.85□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CRBNQ96SW2 442 aa8.85□□□□□ -0.99
CHCHD3P1-201ENST00000425516 PIM2Q9P1W9 311 aa8.85□□□□□ -0.99
CHCHD3P1-201ENST00000425516 DLEC1Q9Y238 1755 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 SMAPO00193 183 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 BBOX1O75936 387 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ITGA6P23229 1130 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ALDH1B1P30837 517 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ATP8B2P98198 1209 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 GRAPQ13588 217 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 DDX46Q7L014 1031 aaKnown RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 SLC51AQ86UW1 340 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 TTLL6Q8N841 843 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 RPGRQ92834 1020 aaKnown RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 ZNF622Q969S3 477 aaKnown RBP eCLIP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 CCDC85AQ96PX6 553 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
CHCHD3P1-201ENST00000425516 BRCA1P38398 1863 aaKnown RBP8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 PNMA6EA0A0J9YXQ4 647 aa8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 RPS8P62241 208 aaKnown RBP8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 CEP85Q6P2H3 762 aa8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 SIRT2Q8IXJ6 389 aa8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 EXOC6Q8TAG9 804 aa8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 C1orf115Q9H7X2 142 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms