RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 PTPRCP08575 1304 aa8.95□□□□□ -0.98
EPHA4-206ENST00000424339 COL15A1P39059 1388 aa8.95□□□□□ -0.98
EPHA4-206ENST00000424339 PRAMEF22A3QJZ6 481 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 ERVV-1B6SEH8 477 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 IPO8O15397 1037 aaKnown RBP8.94□□□□□ -0.98
EPHA4-206ENST00000424339 A1BGP04217 495 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
EPHA4-206ENST00000424339 TRAPPC3LQ5T215 181 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 ARHGAP45Q92619 1136 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 SMC4Q9NTJ3 1288 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 RCAN3Q9UKA8 241 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
EPHA4-206ENST00000424339 MS4A1P11836 297 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 CANXP27824 592 aaKnown RBP8.93□□□□□ -0.98
EPHA4-206ENST00000424339 RFC4P35249 363 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 KCNQ4P56696 695 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 WNT7BP56706 349 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
EPHA4-206ENST00000424339 CLEC4GQ6UXB4 293 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 KIF6Q6ZMV9 814 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 LRP10Q7Z4F1 713 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-206ENST00000424339 SSH1Q8WYL5 1049 aa8.93□□□□□ -0.98
EPHA4-206ENST00000424339 H3BM21 787 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
EPHA4-206ENST00000424339 MYL6BP14649 208 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 FLIIQ13045 1269 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
EPHA4-206ENST00000424339 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 USB1Q9BQ65 265 aaKnown RBP8.92□□□□□ -0.98
EPHA4-206ENST00000424339 NARFQ9UHQ1 456 aa8.92□□□□□ -0.98
EPHA4-206ENST00000424339 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 BCORQ6W2J9 1755 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 C4AP0C0L4 1744 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 SCN7AQ01118 1682 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 IBTKQ9P2D0 1353 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-206ENST00000424339 MAP3K15Q6ZN16 1313 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 USP42Q9H9J4 1324 aaKnown RBP8.91□□□□□ -0.98
EPHA4-206ENST00000424339 BMP1P13497 986 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-206ENST00000424339 COPS6Q7L5N1 327 aa8.91□□□□□ -0.98
EPHA4-206ENST00000424339 API5Q9BZZ5 524 aaKnown RBP8.91□□□□□ -0.98
EPHA4-206ENST00000424339 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-206ENST00000424339 PXDNLA1KZ92 1463 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 ATP10DQ9P241 1426 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 PNPLA7Q6ZV29 1317 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
EPHA4-206ENST00000424339 SKOR1P84550 965 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 NEXNQ0ZGT2 675 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 PROSER3Q2NL68 480 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 KSR2Q6VAB6 950 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 NLGN1Q8N2Q7 840 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
EPHA4-206ENST00000424339 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 SEMA3EO15041 775 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 CAMTA2O94983 1202 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 ZKSCAN2Q63HK3 967 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 ATF7IPQ6VMQ6 1270 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
EPHA4-206ENST00000424339 TRIM46Q7Z4K8 759 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 RIC3Q7Z5B4 369 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 NUP98P52948 1817 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 ANKRD36CQ5JPF3 1778 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 ARFGEF2Q9Y6D5 1785 aa8.89□□□□□ -0.99
EPHA4-206ENST00000424339 PI4KAP2A4QPH2 592 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 ANXA1P04083 346 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 AIMP1Q12904 312 aaKnown RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 TRIM28Q13263 835 aaKnown RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 PARP10Q53GL7 1025 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 COL23A1Q86Y22 540 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 PI4KAP1Q8N8J0 262 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 DNAAF4Q8WXU2 420 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 ARXQ96QS3 562 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 METTL22Q9BUU2 404 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 BCL2L13Q9BXK5 485 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 CHMP4BQ9H444 224 aaKnown RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 PHAXQ9H814 394 aaKnown RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 TBC1D2BQ9UPU7 963 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 HDAC5Q9UQL6 1122 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 N4BP2Q86UW6 1770 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-206ENST00000424339 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
EPHA4-206ENST00000424339 BCAR3O75815 825 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 ALDH1L1O75891 902 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 GYS1P13807 737 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 PIP4K2AP48426 406 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-206ENST00000424339 CCT4P50991 539 aaKnown RBP8.87□□□□□ -0.99
EPHA4-206ENST00000424339 TCIRG1Q13488 830 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 FTSJ3Q8IY81 847 aaKnown RBP8.87□□□□□ -0.99
EPHA4-206ENST00000424339 CCDC191Q8NCU4 936 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 LINS1Q8NG48 757 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 MTFR1LQ9H019 292 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms