RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ANKRD33BA6NCL7 494 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 LRRIQ3A6PVS8 624 aaPredicted RBP7.84□□□□□ -1.15
CNOT4-205ENST00000423368 F13A1P00488 732 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 FUT4P22083 530 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 IFT88Q13099 833 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 SAPCD2Q86UD0 394 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 EPAS1Q99814 870 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 LRRCC1Q9C099 1032 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 U2AF1L5P0DN76 240 aaPredicted RBP7.84□□□□□ -1.15
CNOT4-205ENST00000423368 GNGT1P63211 74 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 U2AF1Q01081 240 aaKnown RBP eCLIP7.84□□□□□ -1.153e-20■■■■■ 41.5
CNOT4-205ENST00000423368 IRF5Q13568 498 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
CNOT4-205ENST00000423368 C14orf80Q86SX3 495 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 GGNBP2Q9H3C7 697 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 MAPK8IP1Q9UQF2 711 aa7.84□□□□□ -1.15
CNOT4-205ENST00000423368 KIAA1107Q9UPP5 1409 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 VSNL1P62760 191 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 TMF1P82094 1093 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 ARMCX5Q6P1M9 558 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 ARHGAP27Q6ZUM4 889 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 TMEM110Q86TL2 294 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 BLOC1S6Q9UL45 172 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 RPRD2Q5VT52 1461 aaKnown RBP7.83□□□□□ -1.16
CNOT4-205ENST00000423368 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 SMIM24O75264 130 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 LMOD1P29536 600 aaPredicted RBP7.83□□□□□ -1.16
CNOT4-205ENST00000423368 CHMP4BP1P59074 171 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 ENOX2Q16206 610 aaKnown RBP7.83□□□□□ -1.16
CNOT4-205ENST00000423368 CCDC40Q4G0X9 1142 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 GOLGA1Q92805 767 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 TCEANC2Q96MN5 208 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 PRAM1Q96QH2 718 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 GOLGA6AQ9NYA3 693 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 LNPEPQ9UIQ6 1025 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 MYO6Q9UM54 1294 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 L3MBTL1Q9Y468 752 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 DYTNA2CJ06 578 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 MYL1P05976 194 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 PDCLQ13371 301 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 TRIM68Q6AZZ1 485 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 RETREG2Q8NC44 543 aa7.83□□□□□ -1.16
CNOT4-205ENST00000423368 RSRC1Q96IZ7 334 aaKnown RBP7.83□□□□□ -1.16
CNOT4-205ENST00000423368 XPO4Q9C0E2 1151 aaKnown RBP7.83□□□□□ -1.16
CNOT4-205ENST00000423368 TEX14Q8IWB6 1497 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 ROCK1Q13464 1354 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 BAZ1AQ9NRL2 1556 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 MAFGO15525 162 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 BUB1BO60566 1050 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 CDKL5O76039 1030 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 SETSIPP0DME0 302 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 NAT1P18440 290 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 GJB2P29033 226 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 CCDC15Q0P6D6 951 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 SF3B2Q13435 895 aaKnown RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 BEND6Q5SZJ8 279 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 PTF1AQ7RTS3 328 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 PROSER2Q86WR7 435 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 DRAXINQ8NBI3 349 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 SPATA32Q96LK8 384 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 GNAT1P11488 350 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 TXLNAP40222 546 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 STK3Q13188 491 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 TTC22Q5TAA0 569 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 GALNT17Q6IS24 598 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 SIRT2Q8IXJ6 389 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 CEP112Q8N8E3 955 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 STAMBPL1Q96FJ0 436 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 JAKMIP1Q96N16 626 aaKnown RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 MMADHCQ9H3L0 296 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-205ENST00000423368 HAUS2Q9NVX0 235 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 RHBDL2Q9NX52 303 aa7.82□□□□□ -1.16
CNOT4-205ENST00000423368 RPGRIP1LQ68CZ1 1315 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 ANKRD18BA2A2Z9 1011 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 IRAK1P51617 712 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 POLE2P56282 527 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 SNCBQ16143 134 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 SLC30A9Q6PML9 568 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 FNBP4Q8N3X1 1017 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-205ENST00000423368 PIDD1Q9HB75 910 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 PCDHGA4Q9Y5G9 962 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 M0R2C6 588 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 ERLIN1O75477 346 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 LARGE1O95461 756 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 PDCD2Q16342 344 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-205ENST00000423368 SPECC1Q5M775 1068 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 KIAA1328Q86T90 577 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 PNMA8AQ86V59 439 aaPredicted RBP7.81□□□□□ -1.16
CNOT4-205ENST00000423368 STAG1Q8WVM7 1258 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 KDM6BO15054 1643 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 CCDC151A5D8V7 595 aa7.81□□□□□ -1.16
CNOT4-205ENST00000423368 GPR37O15354 613 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms