RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 GPT2Q8TD30 523 aa21.83■■□□□ 1.08
PPFIA3-202ENST00000421230 GPATCH3Q96I76 525 aa21.83■■□□□ 1.08
PPFIA3-202ENST00000421230 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
PPFIA3-202ENST00000421230 AK9Q5TCS8 1911 aa21.82■■□□□ 1.08
PPFIA3-202ENST00000421230 IGHMBP2P38935 993 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-202ENST00000421230 HELBQ8NG08 1087 aaPredicted RBP21.82■■□□□ 1.08
PPFIA3-202ENST00000421230 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
PPFIA3-202ENST00000421230 A0A1B0GUL7 405 aa21.81■■□□□ 1.08
PPFIA3-202ENST00000421230 ST18O60284 1047 aa21.81■■□□□ 1.08
PPFIA3-202ENST00000421230 GPR108Q9NPR9 543 aa21.81■■□□□ 1.08
PPFIA3-202ENST00000421230 LRP5O75197 1615 aa21.81■■□□□ 1.08
PPFIA3-202ENST00000421230 PRPF40AO75400 957 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 ZGPATQ8N5A5 531 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 CDC5LQ99459 802 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 ZNF609O15014 1411 aa21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 ERC2O15083 957 aa21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 GLRX3O76003 335 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 ST5P78524 1137 aa21.8■■□□□ 1.08
PPFIA3-202ENST00000421230 MMP10P09238 476 aa21.79■■□□□ 1.08
PPFIA3-202ENST00000421230 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
PPFIA3-202ENST00000421230 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
PPFIA3-202ENST00000421230 CCDC125Q86Z20 511 aa21.79■■□□□ 1.08
PPFIA3-202ENST00000421230 CASC1Q6TDU7 716 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 BOLA2Q9H3K6 86 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 AKAP2Q9Y2D5 859 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 TAF5LO75529 589 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 PDE8BO95263 885 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 ADORA1P30542 326 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 MCM5P33992 734 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 LRSAM1Q6UWE0 723 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 RBM27Q9P2N5 1060 aaKnown RBP21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 MROH5Q6ZUA9 1318 aa21.78■■□□□ 1.08
PPFIA3-202ENST00000421230 ATP2B3Q16720 1220 aa21.77■■□□□ 1.08
PPFIA3-202ENST00000421230 SNAP23O00161 211 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 DDX46Q7L014 1031 aaKnown RBP21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 ZKSCAN5Q9Y2L8 839 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 REC8O95072 547 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 XAGE2Q96GT9 111 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 PODXL2Q9NZ53 605 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 TMEM63CQ9P1W3 806 aa21.76■■□□□ 1.07
PPFIA3-202ENST00000421230 QSER1Q2KHR3 1735 aa21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 RPS8P62241 208 aaKnown RBP21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 R3HCC1Q9Y3T6 440 aaKnown RBP21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 PARP3Q9Y6F1 533 aa21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 NDUFB9Q9Y6M9 179 aa21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 CHRNDQ07001 517 aa21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
PPFIA3-202ENST00000421230 ATP5JP18859 108 aa21.74■■□□□ 1.07
PPFIA3-202ENST00000421230 GORABQ5T7V8 394 aa21.74■■□□□ 1.07
PPFIA3-202ENST00000421230 MAP7D2Q96T17 732 aa21.74■■□□□ 1.07
PPFIA3-202ENST00000421230 CNTROBQ8N137 903 aa21.73■■□□□ 1.07
PPFIA3-202ENST00000421230 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 MINPP1Q9UNW1 487 aa21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 NRXN2Q9P2S2 1712 aa21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 CSPP1Q1MSJ5 1256 aa21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 CRY2Q49AN0 593 aa21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 SLC51AQ86UW1 340 aa21.72■■□□□ 1.07
PPFIA3-202ENST00000421230 WTIPA6NIX2 430 aaPredicted RBP21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 FGFR2P21802 821 aa21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 DNAJC2Q99543 621 aaKnown RBP21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 NSFL1CQ9UNZ2 370 aaKnown RBP21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 ANKRD31Q8N7Z5 1873 aa21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 CCDC39Q9UFE4 941 aa21.71■■□□□ 1.07
PPFIA3-202ENST00000421230 SYCE3A1L190 88 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 MBD3O95983 291 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 RBM10P98175 930 aaKnown RBP21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 GRAPQ13588 217 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 GRAPLQ8TC17 118 aaPredicted RBP21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 LPIN2Q92539 896 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 CHMLP26374 656 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 CCDC158Q5M9N0 1113 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 TTC39AQ5SRH9 613 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 UPF1Q92900 1129 aaKnown RBP eCLIP21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 BRIP1Q9BX63 1249 aa21.7■■□□□ 1.06
PPFIA3-202ENST00000421230 EVI5LQ96CN4 794 aa21.69■■□□□ 1.06
PPFIA3-202ENST00000421230 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
PPFIA3-202ENST00000421230 A0A1B0GUL6 1792 aa21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 BRD1O95696 1058 aa21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 IFIT1P09914 478 aaKnown RBP21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 HAUS7Q99871 368 aa21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 KLRG2A4D1S0 409 aaPredicted RBP21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 SLC5A1P13866 664 aa21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 RBM17Q96I25 401 aaKnown RBP21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 TMX3Q96JJ7 454 aa21.68■■□□□ 1.06
PPFIA3-202ENST00000421230 MCM2P49736 904 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 CUL4AQ13619 759 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 SCARF1Q14162 830 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 SNRKQ9NRH2 765 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 UQCRHLA0A096LP55 91 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 UQCRHP07919 91 aa21.67■■□□□ 1.06
PPFIA3-202ENST00000421230 PHKA1P46020 1223 aa21.66■■□□□ 1.06
PPFIA3-202ENST00000421230 DYNC1I1O14576 645 aa21.65■■□□□ 1.06
PPFIA3-202ENST00000421230 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
PPFIA3-202ENST00000421230 FSD1Q9BTV5 496 aa21.65■■□□□ 1.06
PPFIA3-202ENST00000421230 GOLIM4O00461 696 aa21.65■■□□□ 1.06
PPFIA3-202ENST00000421230 HOXA10P31260 410 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms