RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 CNNM1Q9NRU3 951 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 RTL9Q8NET4 1388 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 ABCC12Q96J65 1359 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 RPS6KA4O75676 772 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 PDE8BO95263 885 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 CUL4AQ13619 759 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 SEC31BQ9NQW1 1179 aa9.77□□□□□ -0.85
COL12A1-204ENST00000419671 CCNL1Q9UK58 526 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-204ENST00000419671 RPAP1Q9BWH6 1393 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-204ENST00000419671 GNPATO15228 680 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 MCMDC2Q4G0Z9 681 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TNPO1Q92973 898 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TCHHQ07283 1943 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 MYH13Q9UKX3 1938 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 SLC27A2O14975 620 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CPA1P15085 419 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CASTP20810 708 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 MCM4P33991 863 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 PKP1Q13835 747 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TTC39AQ5SRH9 613 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 NOL8Q76FK4 1167 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 QTRT2Q9H974 415 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 SRP68Q9UHB9 627 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 NARFQ9UHQ1 456 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TAF6LQ9Y6J9 622 aa9.76□□□□□ -0.85
COL12A1-204ENST00000419671 TNRC6CQ9HCJ0 1690 aaKnown RBP9.76□□□□□ -0.85
COL12A1-204ENST00000419671 CYP2E1P05181 493 aaPredicted RBP9.75□□□□□ -0.85
COL12A1-204ENST00000419671 FGFR2P21802 821 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 MCAMP43121 646 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 AK2P54819 239 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL12A1-204ENST00000419671 ERFEQ4G0M1 354 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 CCDC152Q4G0S7 254 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 PI16Q6UXB8 463 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 JAKMIP1Q96N16 626 aaKnown RBP9.75□□□□□ -0.85
COL12A1-204ENST00000419671 TM6SF1Q9BZW5 370 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 CWC22Q9HCG8 908 aaKnown RBP9.75□□□□□ -0.85
COL12A1-204ENST00000419671 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
COL12A1-204ENST00000419671 ZKSCAN1P17029 563 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 SSFA2P28290 1259 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 ZAP70P43403 619 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 KCNJ4P48050 445 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 ZNF512BQ96KM6 892 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 MAST3O60307 1309 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 SNAP23O00161 211 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 HSP90B1P14625 803 aaKnown RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 PUM3Q15397 648 aaKnown RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 MPHOSPH8Q99549 860 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 RTCBQ9Y3I0 505 aaKnown RBP9.74□□□□□ -0.85
COL12A1-204ENST00000419671 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
COL12A1-204ENST00000419671 CHD4Q14839 1912 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 PHKA1P46020 1223 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 VPS53Q5VIR6 699 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 CLEC17AQ6ZS10 378 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 LPIN2Q92539 896 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 INTS4Q96HW7 963 aaKnown RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
COL12A1-204ENST00000419671 HMG20BQ9P0W2 317 aa9.73□□□□□ -0.85
COL12A1-204ENST00000419671 M0R2C6 588 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 ZPR1O75312 459 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 CYP21A2P08686 494 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 SF3B3Q15393 1217 aaKnown RBP9.72□□□□□ -0.85
COL12A1-204ENST00000419671 SLC10A5Q5PT55 438 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 RNF20Q5VTR2 975 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 OSBP2Q969R2 916 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 ZDHHC9Q9Y397 364 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 LARGE1O95461 756 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
COL12A1-204ENST00000419671 NUCB2P80303 420 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 NAP1L5Q96NT1 182 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-204ENST00000419671 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 DSCC1Q9BVC3 393 aa9.72□□□□□ -0.85
COL12A1-204ENST00000419671 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms