RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-202ENST00000418310 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.17
LIMK1-202ENST00000418310 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.17
LIMK1-202ENST00000418310 SCARF1Q14162 830 aa13.96□□□□□ -0.17
LIMK1-202ENST00000418310 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-202ENST00000418310 TTC39AQ5SRH9 613 aa13.96□□□□□ -0.17
LIMK1-202ENST00000418310 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
LIMK1-202ENST00000418310 CFAP45Q9UL16 551 aa13.96□□□□□ -0.17
LIMK1-202ENST00000418310 KINO60870 393 aaKnown RBP13.96□□□□□ -0.18
LIMK1-202ENST00000418310 CACTINQ8WUQ7 758 aaKnown RBP13.96□□□□□ -0.18
LIMK1-202ENST00000418310 SDF4Q9BRK5 362 aa13.96□□□□□ -0.18
LIMK1-202ENST00000418310 CASP7P55210 303 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 HMGN5P82970 282 aaKnown RBP13.95□□□□□ -0.18
LIMK1-202ENST00000418310 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-202ENST00000418310 PPP4R3BQ5MIZ7 849 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 CEP126Q9P2H0 1117 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.95□□□□□ -0.18
LIMK1-202ENST00000418310 V9GYY5 206 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-202ENST00000418310 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
LIMK1-202ENST00000418310 C5P01031 1676 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 CCDC57Q2TAC2 916 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 EYA2O00167 538 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 PFKFB2O60825 505 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 APPP05067 770 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 PDIA3P30101 505 aaKnown RBP13.94□□□□□ -0.18
LIMK1-202ENST00000418310 TSGA10IPQ3SY00 556 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 SPTLC3Q9NUV7 552 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
LIMK1-202ENST00000418310 GOLGA8BA8MQT2 603 aa13.94□□□□□ -0.18
LIMK1-202ENST00000418310 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 NPHP1O15259 732 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 RNF113AO15541 343 aaKnown RBP13.93□□□□□ -0.18
LIMK1-202ENST00000418310 IGSF3O75054 1194 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 TNNT1P13805 278 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 ZAP70P43403 619 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 CPLX1O14810 134 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 AIFM3Q96NN9 605 aa13.93□□□□□ -0.18
LIMK1-202ENST00000418310 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-202ENST00000418310 USP27XA6NNY8 438 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 H7C1W4 665 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 STK38Q15208 465 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
LIMK1-202ENST00000418310 XAGE2Q96GT9 111 aa13.92□□□□□ -0.18
LIMK1-202ENST00000418310 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 HSPA2P54652 639 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 ORC3Q9UBD5 711 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 PRC1O43663 620 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 IDH1O75874 414 aaKnown RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 TDRD7Q8NHU6 1098 aaKnown RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 FGAP02671 866 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
LIMK1-202ENST00000418310 C8orf76Q96K31 380 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
LIMK1-202ENST00000418310 SNAP23O00161 211 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 SMC2O95347 1197 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 NDUFA8P51970 172 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 PDCL2Q8N4E4 241 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 HELLSQ9NRZ9 838 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
LIMK1-202ENST00000418310 EXOSC10Q01780 885 aaKnown RBP13.9□□□□□ -0.18
LIMK1-202ENST00000418310 STX1AQ16623 288 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 NKX2-3Q8TAU0 364 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-202ENST00000418310 SLIT3O75094 1523 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 JCADQ9P266 1359 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
LIMK1-202ENST00000418310 DSCC1Q9BVC3 393 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-202ENST00000418310 ZHX1Q9UKY1 873 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-202ENST00000418310 TPM3P06753 285 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 SNW1Q13573 536 aaKnown RBP13.89□□□□□ -0.19
LIMK1-202ENST00000418310 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
LIMK1-202ENST00000418310 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms