RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 CABP5Q9NP86 173 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 ERVK-7P63135 1459 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 NEO1Q92859 1461 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
BDNF-208ENST00000418212 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
BDNF-208ENST00000418212 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
BDNF-208ENST00000418212 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.02
BDNF-208ENST00000418212 CCNL1Q9UK58 526 aaPredicted RBP15.21■□□□□ 0.02
BDNF-208ENST00000418212 PLA2R1Q13018 1463 aa15.21■□□□□ 0.02
BDNF-208ENST00000418212 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
BDNF-208ENST00000418212 TMTC2Q8N394 836 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 CENPHQ9H3R5 247 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 TNNT1P13805 278 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 GSPT1P15170 499 aaKnown RBP15.2■□□□□ 0.02
BDNF-208ENST00000418212 LIG1P18858 919 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
BDNF-208ENST00000418212 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
BDNF-208ENST00000418212 KIF4BQ2VIQ3 1234 aa15.2■□□□□ 0.02
BDNF-208ENST00000418212 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 SPTLC2O15270 562 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
BDNF-208ENST00000418212 ABCA8O94911 1581 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 GPAA1O43292 621 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 PHKG2P15735 406 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 SLC27A2O14975 620 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 HMGB2P26583 209 aaKnown RBP15.19■□□□□ 0.02
BDNF-208ENST00000418212 FAM193AP78312 1265 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 CCDC186Q7Z3E2 898 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 KCNG4Q8TDN1 519 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 CUL5Q93034 780 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
BDNF-208ENST00000418212 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
BDNF-208ENST00000418212 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
BDNF-208ENST00000418212 MYL10Q9BUA6 226 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 ABCC4O15439 1325 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 ZAP70P43403 619 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 OGFOD1Q8N543 542 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 CALML4Q96GE6 196 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 SEC62Q99442 399 aaKnown RBP15.18■□□□□ 0.02
BDNF-208ENST00000418212 NYXQ9GZU5 481 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
BDNF-208ENST00000418212 FKBP15Q5T1M5 1219 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
BDNF-208ENST00000418212 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
BDNF-208ENST00000418212 N4BP3O15049 544 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 ERCC4Q92889 916 aaPredicted RBP15.17■□□□□ 0.02
BDNF-208ENST00000418212 DHX58Q96C10 678 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 ZSWIM4Q9H7M6 989 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 VGLL3A8MV65 326 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 FAM200AQ8TCP9 573 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 VEZTQ9HBM0 779 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.02
BDNF-208ENST00000418212 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 TRIM75PA6NK02 468 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 PDE8AO60658 829 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 SSR1P43307 286 aaKnown RBP15.17■□□□□ 0.02
BDNF-208ENST00000418212 AOPEPQ8N6M6 819 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
BDNF-208ENST00000418212 NAPAP54920 295 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 GSTO1P78417 241 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 ZNF397Q8NF99 534 aaPredicted RBP15.16■□□□□ 0.02
BDNF-208ENST00000418212 PLIN2Q99541 437 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
BDNF-208ENST00000418212 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 ZNF804AQ7Z570 1209 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 CDR1P51861 262 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 STX17P56962 302 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 TNIP1Q15025 636 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 SPA17Q15506 151 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 APPBP2Q92624 585 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 CHAMP1Q96JM3 812 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 TTC37Q6PGP7 1564 aa15.16■□□□□ 0.02
BDNF-208ENST00000418212 KCNQ4P56696 695 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 SAP30BPQ9UHR5 308 aaKnown RBP15.15■□□□□ 0.02
BDNF-208ENST00000418212 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 RAD50Q92878 1312 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 INSRP06213 1382 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms