RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RAB3GAP1Q15042 981 aa20.11■□□□□ 0.81
SSBP3-205ENST00000417664 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
SSBP3-205ENST00000417664 TRIM37O94972 964 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
SSBP3-205ENST00000417664 JAKMIP1Q96N16 626 aaKnown RBP20.1■□□□□ 0.81
SSBP3-205ENST00000417664 RPAP1Q9BWH6 1393 aaPredicted RBP20.1■□□□□ 0.81
SSBP3-205ENST00000417664 AKAP11Q9UKA4 1901 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 CHRNDQ07001 517 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 SCARF1Q14162 830 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 AMIGO3Q86WK7 504 aa20.1■□□□□ 0.81
SSBP3-205ENST00000417664 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
SSBP3-205ENST00000417664 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
SSBP3-205ENST00000417664 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-205ENST00000417664 APPBP2Q92624 585 aa20.09■□□□□ 0.81
SSBP3-205ENST00000417664 ALDH8A1Q9H2A2 487 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-205ENST00000417664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
SSBP3-205ENST00000417664 PHF14O94880 888 aa20.08■□□□□ 0.81
SSBP3-205ENST00000417664 PHKA1P46020 1223 aa20.08■□□□□ 0.81
SSBP3-205ENST00000417664 UBE4AQ14139 1066 aa20.08■□□□□ 0.81
SSBP3-205ENST00000417664 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
SSBP3-205ENST00000417664 LIMCH1Q9UPQ0 1083 aa20.08■□□□□ 0.81
SSBP3-205ENST00000417664 PLSCR1O15162 318 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-205ENST00000417664 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 PDRG1Q9NUG6 133 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 MAST3O60307 1309 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 C3orf67Q6ZVT6 689 aa20.07■□□□□ 0.8
SSBP3-205ENST00000417664 CYP2E1P05181 493 aaPredicted RBP20.06■□□□□ 0.8
SSBP3-205ENST00000417664 AK2P54819 239 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
SSBP3-205ENST00000417664 NFIXQ14938 502 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 UBE3CQ15386 1083 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 BLOC1S2Q6QNY1 142 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 CCDC129Q6ZRS4 1044 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 GBP4Q96PP9 640 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 MYH7P12883 1935 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
SSBP3-205ENST00000417664 NPHP1O15259 732 aa20.05■□□□□ 0.8
SSBP3-205ENST00000417664 HSPD1P10809 573 aaKnown RBP20.05■□□□□ 0.8
SSBP3-205ENST00000417664 TXNRD1Q16881 649 aa20.05■□□□□ 0.8
SSBP3-205ENST00000417664 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
SSBP3-205ENST00000417664 SPATA5Q8NB90 893 aa20.05■□□□□ 0.8
SSBP3-205ENST00000417664 OSBP2Q969R2 916 aa20.05■□□□□ 0.8
SSBP3-205ENST00000417664 SH2B1Q9NRF2 756 aaPredicted RBP20.05■□□□□ 0.8
SSBP3-205ENST00000417664 CHGBP05060 677 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 HMGB1P09429 215 aaKnown RBP20.04■□□□□ 0.8
SSBP3-205ENST00000417664 MCM4P33991 863 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 ADD2P35612 726 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 TNPO1Q92973 898 aaKnown RBP20.04■□□□□ 0.8
SSBP3-205ENST00000417664 ANKRD2Q9GZV1 360 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 CTNNA3Q9UI47 895 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 MINPP1Q9UNW1 487 aa20.04■□□□□ 0.8
SSBP3-205ENST00000417664 PTMSP20962 102 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 RXRBP28702 533 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 PI16Q6UXB8 463 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 CNBD1Q8NA66 436 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 GNL3LQ9NVN8 582 aaKnown RBP20.03■□□□□ 0.8
SSBP3-205ENST00000417664 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 GYS1P13807 737 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 RPS6KB1P23443 525 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
SSBP3-205ENST00000417664 CELF1Q92879 486 aaKnown RBP20.03■□□□□ 0.8
SSBP3-205ENST00000417664 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
SSBP3-205ENST00000417664 M0R2C6 588 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 ZBTB22O15209 634 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 CYP21A2P08686 494 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 MAP3K12Q12852 859 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 SLC9C2Q5TAH2 1124 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
SSBP3-205ENST00000417664 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-205ENST00000417664 A0A1B0GUL6 1792 aa20.01■□□□□ 0.79
SSBP3-205ENST00000417664 TM4SF1P30408 202 aa20.01■□□□□ 0.79
SSBP3-205ENST00000417664 CAVIN4Q5BKX8 364 aa20.01■□□□□ 0.79
SSBP3-205ENST00000417664 PIH1D3Q9NQM4 214 aaKnown RBP20.01■□□□□ 0.79
SSBP3-205ENST00000417664 IDH1O75874 414 aaKnown RBP20■□□□□ 0.79
SSBP3-205ENST00000417664 PROM2Q8N271 834 aa20■□□□□ 0.79
SSBP3-205ENST00000417664 BCAMP50895 628 aa20■□□□□ 0.79
SSBP3-205ENST00000417664 NOL8Q76FK4 1167 aaKnown RBP20■□□□□ 0.79
SSBP3-205ENST00000417664 COL4A1P02462 1669 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 SNAP23O00161 211 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 SEMA3EO15041 775 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 PDE6AP16499 860 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 ST5P78524 1137 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 SLFNL1Q499Z3 407 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 FLAD1Q8NFF5 587 aa19.99■□□□□ 0.79
SSBP3-205ENST00000417664 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
SSBP3-205ENST00000417664 DOCK2Q92608 1830 aa19.98■□□□□ 0.79
SSBP3-205ENST00000417664 GPAA1O43292 621 aa19.98■□□□□ 0.79
SSBP3-205ENST00000417664 CPA1P15085 419 aa19.98■□□□□ 0.79
SSBP3-205ENST00000417664 PRR5LQ6MZQ0 368 aa19.98■□□□□ 0.79
SSBP3-205ENST00000417664 PDS5AQ29RF7 1337 aaKnown RBP19.97■□□□□ 0.79
SSBP3-205ENST00000417664 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 PDIA4P13667 645 aaKnown RBP19.97■□□□□ 0.79
SSBP3-205ENST00000417664 GRAPQ13588 217 aa19.97■□□□□ 0.79
SSBP3-205ENST00000417664 GRAPLQ8TC17 118 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms