RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 DDR1Q08345 913 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 SAPCD2Q86UD0 394 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 FAM174AQ8TBP5 190 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 ZNF516Q92618 1163 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 GPKOWQ92917 476 aaPredicted RBP eCLIP7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 FAM122AQ96E09 287 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 PDE4CQ08493 712 aa7.66□□□□□ -1.18
ECHDC1-206ENST00000417628 ITPK1Q13572 414 aa7.66□□□□□ -1.18
ECHDC1-206ENST00000417628 SNX27Q96L92 541 aa7.66□□□□□ -1.18
ECHDC1-206ENST00000417628 TAOK3Q9H2K8 898 aa7.66□□□□□ -1.18
ECHDC1-206ENST00000417628 MAP2P11137 1827 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-206ENST00000417628 ITGAEP38570 1179 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 RNF123Q5XPI4 1314 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 USP31Q70CQ4 1352 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 TTC21AQ8NDW8 1320 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
ECHDC1-206ENST00000417628 TTC21BQ7Z4L5 1316 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 ZNF541Q9H0D2 1346 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 TRAF5O00463 557 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 SKIP12755 728 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 PTPN5P54829 565 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 SH3BP5LQ7L8J4 393 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 ADAM32Q8TC27 787 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 IL21Q9HBE4 155 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 LTN1O94822 1766 aa7.64□□□□□ -1.19
ECHDC1-206ENST00000417628 PCDH11XQ9BZA7 1347 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 PCDH11YQ9BZA8 1340 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 USP17L3A6NCW0 530 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 USP17L4A6NCW7 530 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 USP17L5A8MUK1 530 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 POLRMTO00411 1230 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 TRPA1O75762 1119 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 FBXO46Q6PJ61 603 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 USP17L2Q6R6M4 530 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 USP17L1Q7RTZ2 530 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 CCDC24Q8N4L8 307 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 ZIC5Q96T25 663 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 SLC6A16Q9GZN6 736 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 RNF186Q9NXI6 227 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 HDAC9Q9UKV0 1011 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 TRPM7Q96QT4 1865 aa7.63□□□□□ -1.19
ECHDC1-206ENST00000417628 FER1L6Q2WGJ9 1857 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 H0YGN5 161 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 C21orf2O43822 256 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 CELF2O95319 508 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 C2CD5Q86YS7 1000 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 DEPDC4Q8N2C3 294 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 NKX2-3Q8TAU0 364 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 PIGBQ92521 554 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 ARHGAP9Q9BRR9 750 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 CABP1Q9NZU7 370 aa7.62□□□□□ -1.19
ECHDC1-206ENST00000417628 SCN11AQ9UI33 1791 aa7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 BRD1O95696 1058 aa7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 RAPGEFL1Q9UHV5 662 aa7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 ZMIZ1Q9ULJ6 1067 aa7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 CD163L1Q9NR16 1453 aa7.61□□□□□ -1.19
ECHDC1-206ENST00000417628 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 H0YIN7 160 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 RPS6KA4O75676 772 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 INTS3Q68E01 1043 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 SH3RF1Q7Z6J0 888 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 BAP1Q92560 729 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 GZF1Q9H116 711 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 STXBP5LQ9Y2K9 1186 aa7.6□□□□□ -1.19
ECHDC1-206ENST00000417628 KDRP35968 1356 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 A0A0C4DFX4 3053 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 SZT2Q5T011 3432 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 S1PR4O95977 384 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 RC3H1Q5TC82 1133 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 SPNS2Q8IVW8 549 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 SYNE4Q8N205 404 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 STK32AQ8WU08 396 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 SRP68Q9UHB9 627 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 ITGB4P16144 1822 aa7.59□□□□□ -1.19
ECHDC1-206ENST00000417628 RBBP6Q7Z6E9 1792 aaKnown RBP7.59□□□□□ -1.2
ECHDC1-206ENST00000417628 MAP3K19Q56UN5 1328 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 TRIOBPQ9H2D6 2365 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms