RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
CCT3-208ENST00000415548 IPO8O15397 1037 aaKnown RBP10.53□□□□□ -0.72
CCT3-208ENST00000415548 PLIN1O60240 522 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
CCT3-208ENST00000415548 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
CCT3-208ENST00000415548 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
CCT3-208ENST00000415548 TRIM27P14373 513 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
CCT3-208ENST00000415548 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 DPF2Q92785 391 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 PSME4Q14997 1843 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 PASKQ96RG2 1323 aa10.53□□□□□ -0.72
CCT3-208ENST00000415548 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 H7C1D1 291 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 RPS12P25398 132 aaKnown RBP10.52□□□□□ -0.73
CCT3-208ENST00000415548 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
CCT3-208ENST00000415548 INTS3Q68E01 1043 aaKnown RBP10.52□□□□□ -0.73
CCT3-208ENST00000415548 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
CCT3-208ENST00000415548 ATF7IPQ6VMQ6 1270 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 DNAJC5GQ8N7S2 189 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 KLHDC4Q8TBB5 520 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 MEIS3Q99687 375 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 COA1Q9GZY4 146 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 IRS2Q9Y4H2 1338 aa10.52□□□□□ -0.73
CCT3-208ENST00000415548 EGFRP00533 1210 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 TBC1D10BQ4KMP7 808 aaPredicted RBP10.51□□□□□ -0.73
CCT3-208ENST00000415548 LRRC24Q50LG9 513 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
CCT3-208ENST00000415548 ZKSCAN2Q63HK3 967 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 AGBL3Q8NEM8 1001 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 MXD3Q9BW11 206 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 RIPOR2Q9Y4F9 1068 aa10.51□□□□□ -0.73
CCT3-208ENST00000415548 LRRFIP2Q9Y608 721 aaKnown RBP10.51□□□□□ -0.73
CCT3-208ENST00000415548 ZNF646O15015 1829 aaPredicted RBP10.5□□□□□ -0.73
CCT3-208ENST00000415548 RFX5P48382 616 aaPredicted RBP10.5□□□□□ -0.73
CCT3-208ENST00000415548 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.731e-6■■■■□ 23.7
CCT3-208ENST00000415548 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
CCT3-208ENST00000415548 C15orf52Q6ZUT6 534 aaKnown RBP10.5□□□□□ -0.73
CCT3-208ENST00000415548 GMLQ99445 158 aa10.5□□□□□ -0.73
CCT3-208ENST00000415548 CD209Q9NNX6 404 aa10.5□□□□□ -0.73
CCT3-208ENST00000415548 MROH5Q6ZUA9 1318 aa10.5□□□□□ -0.73
CCT3-208ENST00000415548 ZNF609O15014 1411 aa10.5□□□□□ -0.73
CCT3-208ENST00000415548 TRAF5O00463 557 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 ZNF280AP59817 542 aaPredicted RBP10.49□□□□□ -0.73
CCT3-208ENST00000415548 GTF2IP78347 998 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 UBE4AQ14139 1066 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 METTL24Q5JXM2 366 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 STRIP1Q5VSL9 837 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 ZNF804AQ7Z570 1209 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 TMEM57Q8N5G2 664 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
CCT3-208ENST00000415548 KLRG1Q96E93 195 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 GLIS2Q9BZE0 524 aaPredicted RBP10.49□□□□□ -0.73
CCT3-208ENST00000415548 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 PGAP2Q9UHJ9 254 aa10.49□□□□□ -0.73
CCT3-208ENST00000415548 TMEM88BA6NKF7 163 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 EYA2O00167 538 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 GNAI3P08754 354 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 USP17L8P0C7I0 530 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 GYG1P46976 350 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 PTPN12Q05209 780 aaKnown RBP10.48□□□□□ -0.73
CCT3-208ENST00000415548 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 VGLL2Q8N8G2 317 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
CCT3-208ENST00000415548 ASTN2O75129 1339 aaPredicted RBP10.48□□□□□ -0.73
CCT3-208ENST00000415548 POLR2AP24928 1970 aaKnown RBP10.47□□□□□ -0.73
CCT3-208ENST00000415548 PDE8BO95263 885 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 IL1R1P14778 569 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 ATG9AQ7Z3C6 839 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 FAM84BQ96KN1 310 aaPredicted RBP10.47□□□□□ -0.73
CCT3-208ENST00000415548 SIL1Q9H173 461 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 MYOZ2Q9NPC6 264 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 PA2G4Q9UQ80 394 aaKnown RBP10.47□□□□□ -0.73
CCT3-208ENST00000415548 JAG2Q9Y219 1238 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 TRPM7Q96QT4 1865 aa10.47□□□□□ -0.73
CCT3-208ENST00000415548 RLBP1P12271 317 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
CCT3-208ENST00000415548 SCARF1Q14162 830 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 DLK2Q6UY11 383 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 CDC37L1Q7L3B6 337 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 FTSJ3Q8IY81 847 aaKnown RBP10.46□□□□□ -0.73
CCT3-208ENST00000415548 CERS5Q8N5B7 392 aa10.46□□□□□ -0.73
CCT3-208ENST00000415548 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
CCT3-208ENST00000415548 ADM5C9JUS6 153 aa10.45□□□□□ -0.74
CCT3-208ENST00000415548 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
CCT3-208ENST00000415548 CIAO1O76071 339 aa10.45□□□□□ -0.74
CCT3-208ENST00000415548 CELF2O95319 508 aaKnown RBP10.45□□□□□ -0.74
CCT3-208ENST00000415548 GNAI2P04899 355 aa10.45□□□□□ -0.74
CCT3-208ENST00000415548 FGFR2P21802 821 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms