RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 EDC3Q96F86 508 aaKnown RBP8.08□□□□□ -1.12
VPS41-204ENST00000413141 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
VPS41-204ENST00000413141 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 DNAJC2Q99543 621 aaKnown RBP8.08□□□□□ -1.12
VPS41-204ENST00000413141 ESYT1Q9BSJ8 1104 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 FSD1Q9BTV5 496 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 ANKRD2Q9GZV1 360 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 NDUFB9Q9Y6M9 179 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 DUOX1Q9NRD9 1551 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 CACNA1SQ13698 1873 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 DOCK2Q92608 1830 aa8.08□□□□□ -1.12
VPS41-204ENST00000413141 COL1A1P02452 1464 aaPredicted RBP8.07□□□□□ -1.12
VPS41-204ENST00000413141 ZNF804BA4D1E1 1349 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 KIAA1551Q9HCM1 1747 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 UQCRFS1P1P0C7P4 283 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 NPR1P16066 1061 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 MCAMP43121 646 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 PHKA1P46020 1223 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 UBE4AQ14139 1066 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 SCARF1Q14162 830 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 PAG1Q9NWQ8 432 aa8.07□□□□□ -1.12
VPS41-204ENST00000413141 ATF5Q9Y2D1 282 aaPredicted RBP8.07□□□□□ -1.12
VPS41-204ENST00000413141 XDHP47989 1333 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 RAD50Q92878 1312 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 IRS2Q9Y4H2 1338 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 WTIPA6NIX2 430 aaPredicted RBP8.06□□□□□ -1.12
VPS41-204ENST00000413141 HIP1O00291 1037 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 GOLIM4O00461 696 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 PPEF1O14829 653 aaPredicted RBP8.06□□□□□ -1.12
VPS41-204ENST00000413141 SGSM2O43147 1006 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 BBOX1O75936 387 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 REC8O95072 547 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 KCNJ4P48050 445 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 RASGRF1Q13972 1273 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 TMC4Q7Z404 712 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 KBTBD3Q8NAB2 608 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 IL25Q9H293 177 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 DIAPH3Q9NSV4 1193 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 MAST2Q6P0Q8 1798 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 MED23Q9ULK4 1368 aa8.06□□□□□ -1.12
VPS41-204ENST00000413141 MYH7P12883 1935 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 KLRK1P26718 216 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 ANP32AP39687 249 aaKnown RBP8.05□□□□□ -1.12
VPS41-204ENST00000413141 ZAP70P43403 619 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
VPS41-204ENST00000413141 BCAMP50895 628 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 GPSM2P81274 684 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS41-204ENST00000413141 NMIQ13287 307 aaPredicted RBP8.05□□□□□ -1.12
VPS41-204ENST00000413141 STYK1Q6J9G0 422 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 CWC27Q6UX04 472 aaKnown RBP8.05□□□□□ -1.12
VPS41-204ENST00000413141 TICAM2Q86XR7 235 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 C2CD5Q86YS7 1000 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 C22orf23Q9BZE7 217 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 MTFR1LQ9H019 292 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 HMG20BQ9P0W2 317 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 ANKIB1Q9P2G1 1089 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 LEMD3Q9Y2U8 911 aa8.05□□□□□ -1.12
VPS41-204ENST00000413141 A0A0D9SFI3 127 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 H0YIN7 160 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 ZBTB7AO95365 584 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 CYP2E1P05181 493 aaPredicted RBP8.04□□□□□ -1.12
VPS41-204ENST00000413141 CHRNA5P30532 468 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 ALDH1B1P30837 517 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 GYG1P46976 350 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 R3HDM1Q15032 1099 aaKnown RBP8.04□□□□□ -1.12
VPS41-204ENST00000413141 CAVIN4Q5BKX8 364 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 SP8Q8IXZ3 490 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 RUFY2Q8WXA3 655 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 FAM227BQ96M60 508 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 ANO2Q9NQ90 1003 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 ATP6V0A2Q9Y487 856 aa8.04□□□□□ -1.12
VPS41-204ENST00000413141 PDS5AQ29RF7 1337 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 SEMA3EO15041 775 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 EPB41L2O43491 1005 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 UFL1O94874 794 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 CHGBP05060 677 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 TTF1Q15361 905 aaPredicted RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 C15orf52Q6ZUT6 534 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 ZNF622Q969S3 477 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■■□□ 19
VPS41-204ENST00000413141 FAM84BQ96KN1 310 aaPredicted RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
VPS41-204ENST00000413141 LSG1Q9H089 658 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 PIH1D3Q9NQM4 214 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 GNL3LQ9NVN8 582 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms