RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MAP4K3Q8IVH8 894 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 AMER2Q8N7J2 671 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 PRR7Q8TB68 274 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 KISS1RQ969F8 398 aaPredicted RBP0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 DACT3Q96B18 629 aaPredicted RBP0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 LOXL4Q96JB6 756 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 TBC1D32Q96NH3 1257 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 PPP1R10Q96QC0 940 aaKnown RBP0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 ADARB2Q9NS39 739 aaKnown RBP0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 VAV3Q9UKW4 847 aa0.66□□□□□ -2.3
RNU4-88P-201ENST00000411220 A0A0A6YYK5 440 aaPredicted RBP0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 RXRBP28702 533 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 ADMP35318 185 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 PREPP48147 710 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 SPEM2Q0P670 501 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 SSPNQ14714 243 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 RAB44Q7Z6P3 723 aaPredicted RBP0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 PRDM7Q9NQW5 492 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 GJA3Q9Y6H8 435 aa0.65□□□□□ -2.31
RNU4-88P-201ENST00000411220 SEMA7AO75326 666 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 WISP1O95388 367 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 CD46P15529 392 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 CYP27A1Q02318 531 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 PRKCQQ04759 706 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 VMACQ2NL98 169 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 ARSJQ5FYB0 599 aaPredicted RBP0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 PAOXQ6QHF9 649 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 CYFIP1Q7L576 1253 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 KRTAP4-1Q9BYQ7 146 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 VPS33BQ9H267 617 aa0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 ZFR2Q9UPR6 939 aaKnown RBP0.64□□□□□ -2.31
RNU4-88P-201ENST00000411220 GAS2O43903 313 aaKnown RBP0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 PI3P19957 117 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 BRPF1P55201 1214 aaPredicted RBP0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 CENPCQ03188 943 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 FERMT3Q86UX7 667 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 CHST13Q8NET6 341 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 NLRP7Q8WX94 980 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 DNAJC5Q9H3Z4 198 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 IGFLR1Q9H665 355 aa0.63□□□□□ -2.31
RNU4-88P-201ENST00000411220 FAM95CA0A1B0GW59 222 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 ZFP36P26651 326 aaKnown RBP0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 SETDB1Q15047 1291 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 CDSNQ15517 529 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 NFKBIBQ15653 356 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 SGO2Q562F6 1265 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 ANKRD34AQ69YU3 496 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 USP43Q70EL4 1123 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 PANK1Q8TE04 598 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 RBM15Q96T37 977 aaKnown RBP eCLIP0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 TRIM8Q9BZR9 551 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 MCOLN1Q9GZU1 580 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 ARHGEF10LQ9HCE6 1279 aa0.62□□□□□ -2.31
RNU4-88P-201ENST00000411220 MASP2O00187 686 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 GDF10P55107 478 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 C21orf58P58505 322 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 ABHD18Q0P651 414 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 KIAA1211Q6ZU35 1233 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 ZNF765Q7L2R6 523 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 RUSC1Q9BVN2 902 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 ZNF341Q9BYN7 854 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 FRRS1LQ9P0K9 344 aa0.61□□□□□ -2.31
RNU4-88P-201ENST00000411220 SUSD5O60279 629 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 PTK7Q13308 1070 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 CYP2U1Q7Z449 544 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 RHBDD1Q8TEB9 315 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 LPIN3Q9BQK8 851 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 ESYT1Q9BSJ8 1104 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 PRKAG2Q9UGJ0 569 aa0.6□□□□□ -2.31
RNU4-88P-201ENST00000411220 NPIPB8E9PQR5 432 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 FDX1P10109 184 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 PLA2G4AP47712 749 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 SFSWAPQ12872 951 aaKnown RBP0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 AOC3Q16853 763 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 PLD6Q8N2A8 252 aaKnown RBP0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 ZNF366Q8N895 744 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 TTC9Q92623 222 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 GATA6Q92908 595 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 GPKOWQ92917 476 aaPredicted RBP eCLIP0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 CNKSR1Q969H4 720 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 DNAJB12Q9NXW2 375 aaKnown RBP0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 PCDHGC3Q9UN70 934 aa0.59□□□□□ -2.31
RNU4-88P-201ENST00000411220 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RNU4-88P-201ENST00000411220 FCGBPQ9Y6R7 5405 aaPredicted RBP0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 KCNC1P48547 511 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 KRTAP10-3P60369 221 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 PLAURQ03405 335 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 FAM35AQ86V20 835 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 CDK5RAP1Q96SZ6 601 aaKnown RBP0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 ARHGAP9Q9BRR9 750 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 GCM1Q9NP62 436 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 CRCT1Q9UGL9 99 aa0.58□□□□□ -2.32
RNU4-88P-201ENST00000411220 SPDYE5A6NIY4 337 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 COLEC12Q5KU26 742 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 TMEM132EQ6IEE7 984 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 LINC01356Q8N9X3 169 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 BHMTQ93088 406 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 AIDAQ96BJ3 306 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 HRASLS5Q96KN8 279 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 SIGLEC10Q96LC7 697 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms