RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HIP1O00291 1037 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 SLFNL1Q499Z3 407 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 CCDC125Q86Z20 511 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 KBTBD3Q8NAB2 608 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 BRIP1Q9BX63 1249 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 GYG1P46976 350 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 ANKRD2Q9GZV1 360 aa15.06■□□□□ 0
CHMP3-204ENST00000409727 IQSEC3Q9UPP2 1182 aaPredicted RBP15.06■□□□□ 0
CHMP3-204ENST00000409727 A0A1B0GUL6 1792 aa15.05■□□□□ 0
CHMP3-204ENST00000409727 ARAP2Q8WZ64 1704 aa15.05■□□□□ 0
CHMP3-204ENST00000409727 ANKRD31Q8N7Z5 1873 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 UQCRFS1P1P0C7P4 283 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 KLRK1P26718 216 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 UBE4AQ14139 1066 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 KIAA1211Q6ZU35 1233 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 DDRGK1Q96HY6 314 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
CHMP3-204ENST00000409727 ARID4AP29374 1257 aaPredicted RBP15.04■□□□□ -0
CHMP3-204ENST00000409727 SLC4A3P48751 1232 aa15.04■□□□□ -0
CHMP3-204ENST00000409727 VPS37DQ86XT2 251 aa15.04■□□□□ -0
CHMP3-204ENST00000409727 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
CHMP3-204ENST00000409727 PDE6BP35913 854 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 RASGRF1Q13972 1273 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 SPATA5Q8NB90 893 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 ZNF512BQ96KM6 892 aaPredicted RBP15.03■□□□□ -0
CHMP3-204ENST00000409727 SEC62Q99442 399 aaKnown RBP15.03■□□□□ -0
CHMP3-204ENST00000409727 HMG20BQ9P0W2 317 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 ZNF804BA4D1E1 1349 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 CYP2E1P05181 493 aaPredicted RBP15.03■□□□□ -0
CHMP3-204ENST00000409727 SRGNP10124 158 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 HOXA10P31260 410 aaPredicted RBP15.03■□□□□ -0
CHMP3-204ENST00000409727 CAVIN4Q5BKX8 364 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 CCDC129Q6ZRS4 1044 aa15.03■□□□□ -0
CHMP3-204ENST00000409727 GPSM2P81274 684 aa15.02■□□□□ -0
CHMP3-204ENST00000409727 ZNF589Q86UQ0 364 aaPredicted RBP15.02■□□□□ -0
CHMP3-204ENST00000409727 ZNF622Q969S3 477 aaKnown RBP eCLIP15.02■□□□□ -0
CHMP3-204ENST00000409727 GPR101Q96P66 508 aaPredicted RBP15.02■□□□□ -0
CHMP3-204ENST00000409727 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
CHMP3-204ENST00000409727 KIF2CQ99661 725 aa15.02■□□□□ -0
CHMP3-204ENST00000409727 LSG1Q9H089 658 aaKnown RBP15.02■□□□□ -0
CHMP3-204ENST00000409727 PIH1D3Q9NQM4 214 aaKnown RBP15.02■□□□□ -0
CHMP3-204ENST00000409727 NSFL1CQ9UNZ2 370 aaKnown RBP15.02■□□□□ -0
CHMP3-204ENST00000409727 PPEF1O14829 653 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-204ENST00000409727 BBOX1O75936 387 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 NPR1P16066 1061 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 PTH1RQ03431 593 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 C2CD5Q86YS7 1000 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 RNF113AO15541 343 aaKnown RBP15.01□□□□□ -0.01
CHMP3-204ENST00000409727 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
CHMP3-204ENST00000409727 MCCP23508 829 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 FAM84BQ96KN1 310 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-204ENST00000409727 DAXXQ9UER7 740 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-204ENST00000409727 RFX7Q2KHR2 1363 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 AKAP11Q9UKA4 1901 aa15.01□□□□□ -0.01
CHMP3-204ENST00000409727 XDHP47989 1333 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
CHMP3-204ENST00000409727 ZBTB7AO95365 584 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 CHRNA5P30532 468 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 TTF1Q15361 905 aaPredicted RBP15□□□□□ -0.01
CHMP3-204ENST00000409727 WASHC4Q2M389 1173 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 GNL3LQ9NVN8 582 aaKnown RBP15□□□□□ -0.01
CHMP3-204ENST00000409727 PALD1Q9ULE6 856 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
CHMP3-204ENST00000409727 RAD50Q92878 1312 aa15□□□□□ -0.01
CHMP3-204ENST00000409727 UFL1O94874 794 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 MCMDC2Q4G0Z9 681 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 MASTLQ96GX5 879 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 CCDC171Q6TFL3 1326 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 MED23Q9ULK4 1368 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 H0YIN7 160 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 HIBADHP31937 336 aaKnown RBP14.99□□□□□ -0.01
CHMP3-204ENST00000409727 UPF1Q92900 1129 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHMP3-204ENST00000409727 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHMP3-204ENST00000409727 LEMD3Q9Y2U8 911 aa14.99□□□□□ -0.01
CHMP3-204ENST00000409727 M0R2C6 588 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
CHMP3-204ENST00000409727 ZMYM1Q5SVZ6 1142 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 SLC9C2Q5TAH2 1124 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 JAG2Q9Y219 1238 aa14.98□□□□□ -0.01
CHMP3-204ENST00000409727 HSPA4P34932 840 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 R3HDM1Q15032 1099 aaKnown RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 HELLSQ9NRZ9 838 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 ABCF2Q9UG63 623 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 WWC3Q9ULE0 1092 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 MAST3O60307 1309 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 COL1A1P02452 1464 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 C6orf229H3BNL8 230 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 BECN1Q14457 450 aa14.97□□□□□ -0.01
CHMP3-204ENST00000409727 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
CHMP3-204ENST00000409727 SP8Q8IXZ3 490 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms