RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 BAG6P46379 1132 aa16.98■□□□□ 0.31
GPNMB-203ENST00000409458 BECN1Q14457 450 aa16.98■□□□□ 0.31
GPNMB-203ENST00000409458 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
GPNMB-203ENST00000409458 MMP10P09238 476 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 MCCP23508 829 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 PTH1RQ03431 593 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 ZNF589Q86UQ0 364 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-203ENST00000409458 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
GPNMB-203ENST00000409458 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
GPNMB-203ENST00000409458 COL11A2P13942 1736 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-203ENST00000409458 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-203ENST00000409458 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
GPNMB-203ENST00000409458 DOCK2Q92608 1830 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 HSPA4P34932 840 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 BCAMP50895 628 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 RABEP1Q15276 862 aa16.96■□□□□ 0.31
GPNMB-203ENST00000409458 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
GPNMB-203ENST00000409458 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
GPNMB-203ENST00000409458 TICAM2Q86XR7 235 aa16.95■□□□□ 0.3
GPNMB-203ENST00000409458 SEC62Q99442 399 aaKnown RBP16.95■□□□□ 0.3
GPNMB-203ENST00000409458 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
GPNMB-203ENST00000409458 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
GPNMB-203ENST00000409458 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
GPNMB-203ENST00000409458 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 SNX21Q969T3 373 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 PIH1D3Q9NQM4 214 aaKnown RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 KLRK1P26718 216 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 GYG1P46976 350 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 ANAPC15P60006 121 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
GPNMB-203ENST00000409458 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
GPNMB-203ENST00000409458 HOXA10P31260 410 aaPredicted RBP16.93■□□□□ 0.3
GPNMB-203ENST00000409458 KCNJ4P48050 445 aa16.93■□□□□ 0.3
GPNMB-203ENST00000409458 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
GPNMB-203ENST00000409458 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
GPNMB-203ENST00000409458 MAST3O60307 1309 aa16.93■□□□□ 0.3
GPNMB-203ENST00000409458 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
GPNMB-203ENST00000409458 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
GPNMB-203ENST00000409458 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
GPNMB-203ENST00000409458 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
GPNMB-203ENST00000409458 M0R2C6 588 aa16.91■□□□□ 0.3
GPNMB-203ENST00000409458 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
GPNMB-203ENST00000409458 LTBP1Q14766 1721 aa16.91■□□□□ 0.3
GPNMB-203ENST00000409458 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
GPNMB-203ENST00000409458 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
GPNMB-203ENST00000409458 PRPF40BQ6NWY9 871 aaKnown RBP16.91■□□□□ 0.3
GPNMB-203ENST00000409458 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
GPNMB-203ENST00000409458 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
GPNMB-203ENST00000409458 SNX14Q9Y5W7 946 aa16.91■□□□□ 0.3
GPNMB-203ENST00000409458 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
GPNMB-203ENST00000409458 CAVIN4Q5BKX8 364 aa16.9■□□□□ 0.3
GPNMB-203ENST00000409458 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
GPNMB-203ENST00000409458 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
GPNMB-203ENST00000409458 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
GPNMB-203ENST00000409458 PDGFDQ9GZP0 370 aaPredicted RBP16.9■□□□□ 0.3
GPNMB-203ENST00000409458 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.3
GPNMB-203ENST00000409458 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
GPNMB-203ENST00000409458 IDH1O75874 414 aaKnown RBP16.89■□□□□ 0.29
GPNMB-203ENST00000409458 SRGNP10124 158 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 ADD2P35612 726 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 GPSM2P81274 684 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 FBXO33Q7Z6M2 555 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 KCNB2Q92953 911 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 XDHP47989 1333 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
GPNMB-203ENST00000409458 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 APPBP2Q92624 585 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 GNL3LQ9NVN8 582 aaKnown RBP16.88■□□□□ 0.29
GPNMB-203ENST00000409458 BBOX1O75936 387 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 PDE6AP16499 860 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 PDE6BP35913 854 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 VPS53Q5VIR6 699 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 ZSCAN25Q6NSZ9 544 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 TXNRD3Q86VQ6 643 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 LEMD3Q9Y2U8 911 aa16.88■□□□□ 0.29
GPNMB-203ENST00000409458 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
GPNMB-203ENST00000409458 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
GPNMB-203ENST00000409458 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms