RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 SPTLC2O15270 562 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 ATP8B2P98198 1209 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 RBM8AQ9Y5S9 174 aaKnown RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 FAM13AO94988 1023 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 RBM28Q9NW13 759 aaKnown RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 STIM2Q9P246 746 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 KIF14Q15058 1648 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 GRM8O00222 908 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 PDE1AP54750 535 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 F13A1P00488 732 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 HEATR3Q7Z4Q2 680 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CERS3Q8IU89 383 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CNGA4Q8IV77 575 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 DNAI1Q9UI46 699 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 NOL3O60936 208 aaKnown RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 SNX16P57768 344 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 ANO6Q4KMQ2 910 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 GSTA5Q7RTV2 222 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
LTBP1-204ENST00000407925 ANKRD2Q9GZV1 360 aa12.15□□□□□ -0.46
LTBP1-204ENST00000407925 CALCOCO2Q13137 446 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.47
LTBP1-204ENST00000407925 IQUBQ8NA54 791 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 SYT1P21579 422 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 KRT2P35908 639 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 TRIM14Q14142 442 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 SETDB1Q15047 1291 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 ZNF622Q969S3 477 aaKnown RBP eCLIP12.14□□□□□ -0.47
LTBP1-204ENST00000407925 EYA3Q99504 573 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 EBAG9O00559 213 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 GAS8O95995 478 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 AFMP43652 599 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 MMRN2Q9H8L6 949 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
LTBP1-204ENST00000407925 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 SDSP20132 328 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC184Q52MB2 194 aa12.14□□□□□ -0.47
LTBP1-204ENST00000407925 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 ZCRB1Q8TBF4 217 aaKnown RBP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 GMNNO75496 209 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 CLUL1Q15846 466 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 GIMAP6Q6P9H5 292 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 ZNF354CQ86Y25 554 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 OTUD6BQ8N6M0 293 aa12.13□□□□□ -0.47
LTBP1-204ENST00000407925 LUC7L2Q9Y383 392 aaKnown RBP12.13□□□□□ -0.47
LTBP1-204ENST00000407925 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
LTBP1-204ENST00000407925 PLCB3Q01970 1234 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 SLC9C2Q5TAH2 1124 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC186Q7Z3E2 898 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
LTBP1-204ENST00000407925 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC26Q8TAB7 109 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 DACT1Q9NYF0 836 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CLCN1P35523 988 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 PLCD1P51178 756 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 ABCC5O15440 1437 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 DTHD1Q6ZMT9 781 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 Q6ZUG5 572 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 ZKSCAN5Q9Y2L8 839 aa12.12□□□□□ -0.47
LTBP1-204ENST00000407925 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms