RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 TCIRG1Q13488 830 aa17.23■□□□□ 0.35
ITSN2-203ENST00000406921 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
ITSN2-203ENST00000406921 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
ITSN2-203ENST00000406921 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
ITSN2-203ENST00000406921 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
ITSN2-203ENST00000406921 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
ITSN2-203ENST00000406921 CCP110O43303 1012 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
ITSN2-203ENST00000406921 DACT1Q9NYF0 836 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 SYKP43405 635 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 NAPAP54920 295 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
ITSN2-203ENST00000406921 PLEKHF1Q96S99 279 aa17.22■□□□□ 0.35
ITSN2-203ENST00000406921 PTPDC1A2A3K4 754 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 ZAP70P43403 619 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 CALML4Q96GE6 196 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 CHD1O14646 1710 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 GPAA1O43292 621 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 DNA2P51530 1060 aa17.21■□□□□ 0.35
ITSN2-203ENST00000406921 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
ITSN2-203ENST00000406921 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
ITSN2-203ENST00000406921 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
ITSN2-203ENST00000406921 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.35
ITSN2-203ENST00000406921 CCDC181Q5TID7 509 aa17.21■□□□□ 0.34
ITSN2-203ENST00000406921 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.34
ITSN2-203ENST00000406921 KIAA1328Q86T90 577 aa17.21■□□□□ 0.34
ITSN2-203ENST00000406921 TRMT1Q9NXH9 659 aaKnown RBP17.21■□□□□ 0.34
ITSN2-203ENST00000406921 STK32BQ9NY57 414 aa17.21■□□□□ 0.34
ITSN2-203ENST00000406921 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.34
ITSN2-203ENST00000406921 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.34
ITSN2-203ENST00000406921 CACNA2D4Q7Z3S7 1137 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 CTAGE5O15320 804 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 PPP1R12BO60237 982 aaPredicted RBP17.2■□□□□ 0.34
ITSN2-203ENST00000406921 F13A1P00488 732 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
ITSN2-203ENST00000406921 GNAT2P19087 354 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
ITSN2-203ENST00000406921 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 EYA3Q99504 573 aa17.19■□□□□ 0.34
ITSN2-203ENST00000406921 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
ITSN2-203ENST00000406921 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
ITSN2-203ENST00000406921 MTIF2P46199 727 aaKnown RBP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
ITSN2-203ENST00000406921 TNNI2P48788 182 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 SNX21Q969T3 373 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 GGA1Q9UJY5 639 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 SGSM2O43147 1006 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 SIK1P57059 783 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 ZBTB1Q9Y2K1 713 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 SYT1P21579 422 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 GNAQP50148 359 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 FKBP15Q5T1M5 1219 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 ZSCAN30Q86W11 494 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 LPIN2Q92539 896 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 APPBP2Q92624 585 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 MYL10Q9BUA6 226 aa17.18■□□□□ 0.34
ITSN2-203ENST00000406921 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
ITSN2-203ENST00000406921 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
ITSN2-203ENST00000406921 ZSCAN23Q3MJ62 389 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 PLCG2P16885 1265 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 TSG101Q99816 390 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
ITSN2-203ENST00000406921 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 ERBB3P21860 1342 aa17.17■□□□□ 0.34
ITSN2-203ENST00000406921 SLC27A2O14975 620 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 ADCY5O95622 1261 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 PLS1Q14651 629 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 TDRD12Q587J7 1177 aaKnown RBP17.16■□□□□ 0.34
ITSN2-203ENST00000406921 DPP8Q6V1X1 898 aaPredicted RBP17.16■□□□□ 0.34
ITSN2-203ENST00000406921 TMC6Q7Z403 805 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 NUP88Q99567 741 aaPredicted RBP17.16■□□□□ 0.34
ITSN2-203ENST00000406921 USP6P35125 1406 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 PLIN2Q99541 437 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 ACBD3Q9H3P7 528 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 STX1AQ16623 288 aa17.16■□□□□ 0.34
ITSN2-203ENST00000406921 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
ITSN2-203ENST00000406921 HELLSQ9NRZ9 838 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 ABCC4O15439 1325 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms