RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 NYAP1Q6ZVC0 841 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
GGA1-206ENST00000406772 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 A0A087WZG4 1122 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 IGKV5-2P06315 115 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
GGA1-206ENST00000406772 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
GGA1-206ENST00000406772 GSDMDP57764 484 aa17.16■□□□□ 0.34
GGA1-206ENST00000406772 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
GGA1-206ENST00000406772 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
GGA1-206ENST00000406772 ORC3Q9UBD5 711 aaPredicted RBP17.16■□□□□ 0.34
GGA1-206ENST00000406772 RCOR1Q9UKL0 485 aa17.16■□□□□ 0.34
GGA1-206ENST00000406772 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
GGA1-206ENST00000406772 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.344e-9■■■□□ 15.9
GGA1-206ENST00000406772 TNRQ92752 1358 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 KCNA6P17658 529 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 UBASH3AP57075 661 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 KCNB2Q92953 911 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 COL15A1P39059 1388 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 CAVIN2O95810 425 aa17.15■□□□□ 0.34
GGA1-206ENST00000406772 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 KARSQ15046 597 aaKnown RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
GGA1-206ENST00000406772 KLF18A0A0U1RQI7 1052 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 NBPF11Q86T75 865 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 SPTLC2O15270 562 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 CDC25BP30305 580 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 GNG11P61952 73 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 FANCCQ00597 558 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 MTX1Q13505 466 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
GGA1-206ENST00000406772 APPP05067 770 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
GGA1-206ENST00000406772 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
GGA1-206ENST00000406772 SYCP1Q15431 976 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 ZNF202O95125 648 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
GGA1-206ENST00000406772 CPLX3Q8WVH0 158 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 DPF2Q92785 391 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 E7EWF7 191 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 PFKFB2O60825 505 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 TNNT3P45378 269 aaPredicted RBP17.13■□□□□ 0.33
GGA1-206ENST00000406772 GCKRQ14397 625 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
GGA1-206ENST00000406772 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 PNMA6AP0CW24 399 aaPredicted RBP17.12■□□□□ 0.33
GGA1-206ENST00000406772 EVCP57679 992 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 TAF3Q5VWG9 929 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
GGA1-206ENST00000406772 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
GGA1-206ENST00000406772 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 PHF8Q9UPP1 1060 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 C3P01024 1663 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 ZNF609O15014 1411 aa17.12■□□□□ 0.33
GGA1-206ENST00000406772 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
GGA1-206ENST00000406772 PNOCQ13519 176 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
GGA1-206ENST00000406772 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
GGA1-206ENST00000406772 CLIC6Q96NY7 704 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
GGA1-206ENST00000406772 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 IP6K1Q92551 441 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
GGA1-206ENST00000406772 KIF2AO00139 706 aaPredicted RBP17.1■□□□□ 0.33
GGA1-206ENST00000406772 FMR1NBQ8N0W7 255 aaPredicted RBP17.1■□□□□ 0.33
GGA1-206ENST00000406772 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
GGA1-206ENST00000406772 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
GGA1-206ENST00000406772 ATP5JP18859 108 aa17.1■□□□□ 0.33
GGA1-206ENST00000406772 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
GGA1-206ENST00000406772 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
GGA1-206ENST00000406772 PFKFB1P16118 471 aa17.09■□□□□ 0.33
GGA1-206ENST00000406772 SYKP43405 635 aa17.09■□□□□ 0.33
GGA1-206ENST00000406772 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
GGA1-206ENST00000406772 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
GGA1-206ENST00000406772 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms