RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ASIC1P78348 528 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
SMCR8-201ENST00000406438 MCMDC2Q4G0Z9 681 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 CCDC129Q6ZRS4 1044 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 KIF1BO60333 1816 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
SMCR8-201ENST00000406438 NAA16Q6N069 864 aaPredicted RBP13.64□□□□□ -0.23
SMCR8-201ENST00000406438 GNAT2P19087 354 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
SMCR8-201ENST00000406438 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
SMCR8-201ENST00000406438 NOL3O60936 208 aaKnown RBP13.63□□□□□ -0.23
SMCR8-201ENST00000406438 KRT2P35908 639 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 NEK11Q8NG66 645 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 CTAGE15A4D2H0 777 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 CTAGE8P0CG41 777 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 CTAGE6Q86UF2 777 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 CTAGE4Q8IX94 777 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 LAMC3Q9Y6N6 1575 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
SMCR8-201ENST00000406438 PLCG2P16885 1265 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 ATP6V1AP38606 617 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
SMCR8-201ENST00000406438 MCM6Q14566 821 aa13.63□□□□□ -0.23
SMCR8-201ENST00000406438 PICALMQ13492 652 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 TRIM7Q9C029 511 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 MSH6P52701 1360 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 TPD52P55327 224 aaPredicted RBP13.62□□□□□ -0.23
SMCR8-201ENST00000406438 CFAP157Q5JU67 520 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 RAB11FIP4Q86YS3 637 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 MAGEB6P1A0A0J9YX57 407 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 FRMD4BQ9Y2L6 1034 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 HS2ST1Q7LGA3 356 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
SMCR8-201ENST00000406438 F8W031 263 aaPredicted RBP13.61□□□□□ -0.23
SMCR8-201ENST00000406438 ALDH3A1P30838 453 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 GJC1P36383 396 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 PPP1R7Q15435 360 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 KRT222Q8N1A0 295 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 GOLGA1Q92805 767 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 ATP2C2O75185 946 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 UBXN1Q04323 297 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 CEP128Q6ZU80 1094 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 GNA11P29992 359 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 Q6ZUG5 572 aa13.61□□□□□ -0.23
SMCR8-201ENST00000406438 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 GRM8O00222 908 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 SYT1P21579 422 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 FAM169AQ9Y6X4 670 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
SMCR8-201ENST00000406438 ATP2B3Q16720 1220 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 CCDC114Q96M63 670 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 DTHD1Q6ZMT9 781 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 SRRTQ9BXP5 876 aaKnown RBP13.6□□□□□ -0.23
SMCR8-201ENST00000406438 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
SMCR8-201ENST00000406438 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 KIFAP3Q92845 792 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 CCT6BQ92526 530 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 SELENOSQ9BQE4 189 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 CCDC42Q96M95 316 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 CRCPO75575 148 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 SKILP12757 684 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 SLC8A3P57103 927 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 IL16Q14005 1332 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 TERF1P54274 439 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMCR8-201ENST00000406438 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 HAUS7Q99871 368 aa13.59□□□□□ -0.23
SMCR8-201ENST00000406438 NUCB1Q02818 461 aa13.58□□□□□ -0.23
SMCR8-201ENST00000406438 KLHL40Q2TBA0 621 aa13.58□□□□□ -0.23
SMCR8-201ENST00000406438 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.23
SMCR8-201ENST00000406438 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.23
SMCR8-201ENST00000406438 TRIM75PA6NK02 468 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC121Q6ZUS5 278 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms