RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 COL4A1P02462 1669 aa16■□□□□ 0.15
CEACAM1-206ENST00000403136 ZFYP08048 801 aaPredicted RBP16■□□□□ 0.15
CEACAM1-206ENST00000403136 BCAMP50895 628 aa16■□□□□ 0.15
CEACAM1-206ENST00000403136 NECTIN1Q15223 517 aa16■□□□□ 0.15
CEACAM1-206ENST00000403136 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
CEACAM1-206ENST00000403136 ANKRD2Q9GZV1 360 aa16■□□□□ 0.15
CEACAM1-206ENST00000403136 ST18O60284 1047 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 GRAPQ13588 217 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 KCNB2Q92953 911 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 HMG20BQ9P0W2 317 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 RBM8AQ9Y5S9 174 aaKnown RBP15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
CEACAM1-206ENST00000403136 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 NEK4P51957 841 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 SPATA5Q8NB90 893 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 KCNJ4P48050 445 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 CCDC129Q6ZRS4 1044 aa15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 RPGRQ92834 1020 aaKnown RBP15.98■□□□□ 0.15
CEACAM1-206ENST00000403136 SPEF2Q9C093 1822 aa15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 RASGRF1Q13972 1273 aa15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 SLC15A2Q16348 729 aa15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 RBM17Q96I25 401 aaKnown RBP15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.97■□□□□ 0.15
CEACAM1-206ENST00000403136 CAVIN4Q5BKX8 364 aa15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 OSBP2Q969R2 916 aa15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 TAF1P21675 1872 aa15.96■□□□□ 0.15
CEACAM1-206ENST00000403136 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 HOXA10P31260 410 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 GYG1P46976 350 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 FAM84BQ96KN1 310 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 SLC27A2O14975 620 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 FBXO33Q7Z6M2 555 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 APPBP2Q92624 585 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 BRIP1Q9BX63 1249 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 SLKQ9H2G2 1235 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 PARP3Q9Y6F1 533 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
CEACAM1-206ENST00000403136 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 BBOX1O75936 387 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 MMP10P09238 476 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 ADD2P35612 726 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 MCM2P49736 904 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 SLC9C2Q5TAH2 1124 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 UPF3BQ9BZI7 483 aaKnown RBP15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 TM6SF1Q9BZW5 370 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 MAST3O60307 1309 aa15.94■□□□□ 0.14
CEACAM1-206ENST00000403136 AKAP11Q9UKA4 1901 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 TNRC6CQ9HCJ0 1690 aaKnown RBP15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 M0R2C6 588 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 BAG6P46379 1132 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
CEACAM1-206ENST00000403136 MAP3K12Q12852 859 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 TSGA10IPQ3SY00 556 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 PUS7LQ9H0K6 701 aaKnown RBP15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 HSPD1P10809 573 aaKnown RBP15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 VPS53Q5VIR6 699 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 ZSWIM6Q9HCJ5 1215 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 ARAP2Q8WZ64 1704 aa15.92■□□□□ 0.14
CEACAM1-206ENST00000403136 CASZ1Q86V15 1759 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 PDE6AP16499 860 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 KLRK1P26718 216 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 HIBADHP31937 336 aaKnown RBP15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 MSL1Q68DK7 614 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 DEFB132Q7Z7B7 95 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 JAKMIP1Q96N16 626 aaKnown RBP15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 DENND2AQ9ULE3 1009 aa15.91■□□□□ 0.14
CEACAM1-206ENST00000403136 XDHP47989 1333 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms