RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 NECTIN1Q15223 517 aa30.86■■■□□ 2.53
CPNE1-205ENST00000401607 MCMDC2Q4G0Z9 681 aa30.86■■■□□ 2.53
CPNE1-205ENST00000401607 ZMYM1Q5SVZ6 1142 aa30.86■■■□□ 2.53
CPNE1-205ENST00000401607 KCNB2Q92953 911 aa30.86■■■□□ 2.53
CPNE1-205ENST00000401607 MINPP1Q9UNW1 487 aa30.86■■■□□ 2.53
CPNE1-205ENST00000401607 RBM8AQ9Y5S9 174 aaKnown RBP30.86■■■□□ 2.53
CPNE1-205ENST00000401607 RPS8P62241 208 aaKnown RBP30.85■■■□□ 2.53
CPNE1-205ENST00000401607 RNF113AO15541 343 aaKnown RBP30.84■■■□□ 2.53
CPNE1-205ENST00000401607 SERPINB2P05120 415 aa30.84■■■□□ 2.53
CPNE1-205ENST00000401607 CCDC129Q6ZRS4 1044 aa30.84■■■□□ 2.53
CPNE1-205ENST00000401607 HELLSQ9NRZ9 838 aa30.84■■■□□ 2.53
CPNE1-205ENST00000401607 NEK4P51957 841 aa30.84■■■□□ 2.53
CPNE1-205ENST00000401607 DDR1Q08345 913 aa30.84■■■□□ 2.53
CPNE1-205ENST00000401607 PRPF40BQ6NWY9 871 aaKnown RBP30.83■■■□□ 2.53
CPNE1-205ENST00000401607 COL23A1Q86Y22 540 aaPredicted RBP30.82■■■□□ 2.52
CPNE1-205ENST00000401607 CYP2E1P05181 493 aaPredicted RBP30.82■■■□□ 2.52
CPNE1-205ENST00000401607 POLRMTO00411 1230 aaKnown RBP30.81■■■□□ 2.52
CPNE1-205ENST00000401607 HMG20BQ9P0W2 317 aa30.81■■■□□ 2.52
CPNE1-205ENST00000401607 CREB3L3Q68CJ9 461 aa30.8■■■□□ 2.52
CPNE1-205ENST00000401607 MYH7P12883 1935 aa30.8■■■□□ 2.52
CPNE1-205ENST00000401607 UBE4AQ14139 1066 aa30.79■■■□□ 2.52
CPNE1-205ENST00000401607 LRRFIP1Q32MZ4 808 aaKnown RBP30.79■■■□□ 2.52
CPNE1-205ENST00000401607 ANP32EQ9BTT0 268 aa30.79■■■□□ 2.52
CPNE1-205ENST00000401607 UPF3BQ9BZI7 483 aaKnown RBP30.79■■■□□ 2.52
CPNE1-205ENST00000401607 MAST3O60307 1309 aa30.79■■■□□ 2.52
CPNE1-205ENST00000401607 ZFYP08048 801 aaPredicted RBP30.79■■■□□ 2.52
CPNE1-205ENST00000401607 BCAMP50895 628 aa30.79■■■□□ 2.52
CPNE1-205ENST00000401607 ST5P78524 1137 aa30.79■■■□□ 2.52
CPNE1-205ENST00000401607 PIH1D3Q9NQM4 214 aaKnown RBP30.79■■■□□ 2.52
CPNE1-205ENST00000401607 WTIPA6NIX2 430 aaPredicted RBP30.78■■■□□ 2.52
CPNE1-205ENST00000401607 KCNJ4P48050 445 aa30.78■■■□□ 2.52
CPNE1-205ENST00000401607 RASGRF1Q13972 1273 aa30.78■■■□□ 2.52
CPNE1-205ENST00000401607 TTF1Q15361 905 aaPredicted RBP30.78■■■□□ 2.52
CPNE1-205ENST00000401607 SLC27A2O14975 620 aa30.77■■■□□ 2.52
CPNE1-205ENST00000401607 SPATA5Q8NB90 893 aa30.77■■■□□ 2.52
CPNE1-205ENST00000401607 DDIT3P35638 169 aa30.77■■■□□ 2.52
CPNE1-205ENST00000401607 OSBP2Q969R2 916 aa30.77■■■□□ 2.52
CPNE1-205ENST00000401607 M0R2C6 588 aa30.76■■■□□ 2.51
CPNE1-205ENST00000401607 GRAPQ13588 217 aa30.76■■■□□ 2.51
CPNE1-205ENST00000401607 CRY2Q49AN0 593 aa30.76■■■□□ 2.51
CPNE1-205ENST00000401607 FLAD1Q8NFF5 587 aa30.76■■■□□ 2.51
CPNE1-205ENST00000401607 GRAPLQ8TC17 118 aaPredicted RBP30.76■■■□□ 2.51
CPNE1-205ENST00000401607 MYO5AQ9Y4I1 1855 aaKnown RBP30.75■■■□□ 2.51
CPNE1-205ENST00000401607 ZNF804BA4D1E1 1349 aa30.75■■■□□ 2.51
CPNE1-205ENST00000401607 PNPLA7Q6ZV29 1317 aa30.75■■■□□ 2.51
CPNE1-205ENST00000401607 IL27Q8NEV9 243 aa30.75■■■□□ 2.51
CPNE1-205ENST00000401607 ADCK5Q3MIX3 580 aa30.74■■■□□ 2.51
CPNE1-205ENST00000401607 DOCK2Q92608 1830 aa30.74■■■□□ 2.51
CPNE1-205ENST00000401607 APPBP2Q92624 585 aa30.74■■■□□ 2.51
CPNE1-205ENST00000401607 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.74■■■□□ 2.513e-7■■■■■ 27.1
CPNE1-205ENST00000401607 ANKRD2Q9GZV1 360 aa30.74■■■□□ 2.51
CPNE1-205ENST00000401607 NRXN2Q9P2S2 1712 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 ZKSCAN1P17029 563 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-205ENST00000401607 ADD2P35612 726 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 MCM2P49736 904 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 VPS53Q5VIR6 699 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 NLGN1Q8N2Q7 840 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 TM6SF1Q9BZW5 370 aa30.73■■■□□ 2.51
CPNE1-205ENST00000401607 U3KPZ7 1027 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-205ENST00000401607 GYG1P46976 350 aa30.72■■■□□ 2.51
CPNE1-205ENST00000401607 TTC14Q96N46 770 aa30.72■■■□□ 2.51
CPNE1-205ENST00000401607 CAMKK2Q96RR4 588 aa30.72■■■□□ 2.51
CPNE1-205ENST00000401607 DSCC1Q9BVC3 393 aa30.72■■■□□ 2.51
CPNE1-205ENST00000401607 RPAP1Q9BWH6 1393 aaPredicted RBP30.72■■■□□ 2.51
CPNE1-205ENST00000401607 EZH2Q15910 746 aaKnown RBP30.71■■■□□ 2.51
CPNE1-205ENST00000401607 WASHC4Q2M389 1173 aa30.71■■■□□ 2.51
CPNE1-205ENST00000401607 RNF20Q5VTR2 975 aa30.71■■■□□ 2.51
CPNE1-205ENST00000401607 JAKMIP1Q96N16 626 aaKnown RBP30.71■■■□□ 2.51
CPNE1-205ENST00000401607 TAF6LQ9Y6J9 622 aa30.71■■■□□ 2.51
CPNE1-205ENST00000401607 ZSCAN25Q6NSZ9 544 aa30.71■■■□□ 2.51
CPNE1-205ENST00000401607 RPGRQ92834 1020 aaKnown RBP30.71■■■□□ 2.51
CPNE1-205ENST00000401607 FOXD4L1Q9NU39 408 aa30.71■■■□□ 2.51
CPNE1-205ENST00000401607 IDH1O75874 414 aaKnown RBP30.7■■■□□ 2.51
CPNE1-205ENST00000401607 HSP90AA1P07900 732 aaKnown RBP30.7■■■□□ 2.51
CPNE1-205ENST00000401607 CASTP20810 708 aaKnown RBP30.7■■■□□ 2.51
CPNE1-205ENST00000401607 EN1Q05925 392 aaPredicted RBP30.7■■■□□ 2.51
CPNE1-205ENST00000401607 PUS7LQ9H0K6 701 aaKnown RBP30.7■■■□□ 2.51
CPNE1-205ENST00000401607 ZSWIM6Q9HCJ5 1215 aa30.7■■■□□ 2.51
CPNE1-205ENST00000401607 HSPD1P10809 573 aaKnown RBP30.69■■■□□ 2.5
CPNE1-205ENST00000401607 TSGA10IPQ3SY00 556 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 SLC9C2Q5TAH2 1124 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 SLC51AQ86UW1 340 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 FAM84BQ96KN1 310 aaPredicted RBP30.69■■■□□ 2.5
CPNE1-205ENST00000401607 CHMP5Q9NZZ3 219 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 KLRG2A4D1S0 409 aaPredicted RBP30.69■■■□□ 2.5
CPNE1-205ENST00000401607 CPA1P15085 419 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 KLRK1P26718 216 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 ANO8Q9HCE9 1232 aaPredicted RBP30.69■■■□□ 2.5
CPNE1-205ENST00000401607 WWC3Q9ULE0 1092 aa30.69■■■□□ 2.5
CPNE1-205ENST00000401607 ANKRD31Q8N7Z5 1873 aa30.68■■■□□ 2.5
CPNE1-205ENST00000401607 COL1A1P02452 1464 aaPredicted RBP30.68■■■□□ 2.5
CPNE1-205ENST00000401607 UBE3CQ15386 1083 aa30.68■■■□□ 2.5
CPNE1-205ENST00000401607 TMX3Q96JJ7 454 aa30.68■■■□□ 2.5
CPNE1-205ENST00000401607 PDE6AP16499 860 aa30.67■■■□□ 2.5
CPNE1-205ENST00000401607 CAVIN4Q5BKX8 364 aa30.67■■■□□ 2.5
CPNE1-205ENST00000401607 TCRBV5S4A2TA0A5A2 114 aa30.66■■■□□ 2.5
CPNE1-205ENST00000401607 FBXO33Q7Z6M2 555 aa30.66■■■□□ 2.5
CPNE1-205ENST00000401607 IQSEC3Q9UPP2 1182 aaPredicted RBP30.66■■■□□ 2.5
CPNE1-205ENST00000401607 FOXP2O15409 715 aa30.66■■■□□ 2.5
CPNE1-205ENST00000401607 HOXA10P31260 410 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms