RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CADPS2Q86UW7 1296 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 FERMT1Q9BQL6 677 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 NMIQ13287 307 aaPredicted RBP15.65■□□□□ 0.1
VAPA-202ENST00000400000 TTC22Q5TAA0 569 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 BTG4Q9NY30 223 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 SPDYE3A6NKU9 549 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 SDSP20132 328 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 PPP2R5DQ14738 602 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 TMCO4Q5TGY1 634 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
VAPA-202ENST00000400000 HSF2BPO75031 334 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 RNASE9P60153 205 aaKnown RBP15.65■□□□□ 0.1
VAPA-202ENST00000400000 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 PPM1EQ8WY54 764 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
VAPA-202ENST00000400000 SF3A3Q12874 501 aaKnown RBP eCLIP15.64■□□□□ 0.092e-20■■■■□ 20.6
VAPA-202ENST00000400000 PTPRCP08575 1304 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 CTAGE5O15320 804 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 NBPF14Q5TI25 921 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 RAB3IL1Q8TBN0 382 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 UAP1Q16222 522 aaPredicted RBP15.64■□□□□ 0.09
VAPA-202ENST00000400000 DNAJC25Q9H1X3 360 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 RAPGEF1Q13905 1077 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 CCDC160A6NGH7 325 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 DNM1Q05193 864 aaKnown RBP15.64■□□□□ 0.09
VAPA-202ENST00000400000 ZSCAN23Q3MJ62 389 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 FCHSD1Q86WN1 690 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 ESR2Q92731 530 aa15.64■□□□□ 0.09
VAPA-202ENST00000400000 CCDC65Q8IXS2 484 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 TMX3Q96JJ7 454 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 CCDC114Q96M63 670 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 IQCGQ9H095 443 aaKnown RBP15.63■□□□□ 0.09
VAPA-202ENST00000400000 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 TCP10Q12799 353 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 TFCP2Q12800 502 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 MCM6Q14566 821 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 USP48Q86UV5 1035 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 LMTK3Q96Q04 1460 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 KRT23Q9C075 422 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 ERCC5P28715 1186 aaPredicted RBP15.63■□□□□ 0.09
VAPA-202ENST00000400000 ZNF526Q8TF50 670 aaPredicted RBP15.63■□□□□ 0.09
VAPA-202ENST00000400000 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
VAPA-202ENST00000400000 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 CLSTN2Q9H4D0 955 aa15.63■□□□□ 0.09
VAPA-202ENST00000400000 CAMSAP2Q08AD1 1489 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 CEP112Q8N8E3 955 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 NOD1Q9Y239 953 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 IRS4O14654 1257 aaPredicted RBP15.62■□□□□ 0.09
VAPA-202ENST00000400000 UQCRFS1P1P0C7P4 283 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 IFT81Q8WYA0 676 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 FAM98CQ17RN3 349 aaKnown RBP15.62■□□□□ 0.09
VAPA-202ENST00000400000 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 RRP36Q96EU6 259 aaKnown RBP15.62■□□□□ 0.09
VAPA-202ENST00000400000 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 FAM160A1Q05DH4 1040 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 CFAP58Q5T655 872 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 CCDC129Q6ZRS4 1044 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 C6orf50Q9HD87 102 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 FBF1Q8TES7 1133 aa15.62■□□□□ 0.09
VAPA-202ENST00000400000 MYCP01106 439 aaPredicted RBP15.61■□□□□ 0.09
VAPA-202ENST00000400000 CPA1P15085 419 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 PPP1R21Q6ZMI0 780 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 MAPK8IP1Q9UQF2 711 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 MCMDC2Q4G0Z9 681 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 UBXN1Q04323 297 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
VAPA-202ENST00000400000 ZNF174Q15697 407 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 IMPG2Q9BZV3 1241 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 MYCLP12524 364 aaPredicted RBP15.61■□□□□ 0.09
VAPA-202ENST00000400000 MCM3P25205 808 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 LZTFL1Q9NQ48 299 aa15.61■□□□□ 0.09
VAPA-202ENST00000400000 NCBP1Q09161 790 aaKnown RBP15.6■□□□□ 0.09
VAPA-202ENST00000400000 HGSO14964 777 aaPredicted RBP15.6■□□□□ 0.09
VAPA-202ENST00000400000 RFX1P22670 979 aa15.6■□□□□ 0.09
VAPA-202ENST00000400000 RNF34Q969K3 372 aa15.6■□□□□ 0.09
VAPA-202ENST00000400000 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
VAPA-202ENST00000400000 GRM8O00222 908 aa15.6■□□□□ 0.09
VAPA-202ENST00000400000 CCDC6Q16204 474 aa15.6■□□□□ 0.09
VAPA-202ENST00000400000 GUCA1BQ9UMX6 200 aa15.6■□□□□ 0.09
VAPA-202ENST00000400000 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
VAPA-202ENST00000400000 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
VAPA-202ENST00000400000 TLDC2A0PJX2 215 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 RAD51AP2Q09MP3 1159 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 USH1GQ495M9 461 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 CCDC169A6NNP5 214 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 UFL1O94874 794 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 IL2RBP14784 551 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 KIF14Q15058 1648 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 KRT2P35908 639 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 NDUFB9Q9Y6M9 179 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 KCNK9Q9NPC2 374 aa15.59■□□□□ 0.09
VAPA-202ENST00000400000 TBC1D7Q9P0N9 293 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms