RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 GJB2P29033 226 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 BMP15O95972 392 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 EEF2P13639 858 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 SLC8A3P57103 927 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 CNGA1P29973 690 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 TMX1Q9H3N1 280 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 ALG1Q9BT22 464 aa13.74□□□□□ -0.21
CACNA1C-213ENST00000399629 SNX16P57768 344 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 DDX12PQ92771 950 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 GAS8O95995 478 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 TMEM110-MUSTN1A8MSY1 372 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 BIN1O00499 593 aa13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-213ENST00000399629 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 ASIC1P78348 528 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 AFMP43652 599 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 ISM2Q6H9L7 571 aa13.72□□□□□ -0.21
CACNA1C-213ENST00000399629 A2MP01023 1474 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 KRT2P35908 639 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 ALDH1L1O75891 902 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 CCDC102BQ68D86 513 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-213ENST00000399629 GCP02774 474 aa13.71□□□□□ -0.22
CACNA1C-213ENST00000399629 CALML3P27482 149 aa13.71□□□□□ -0.22
CACNA1C-213ENST00000399629 KIAA0753Q2KHM9 967 aa13.71□□□□□ -0.22
CACNA1C-213ENST00000399629 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.22
CACNA1C-213ENST00000399629 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.71□□□□□ -0.22
CACNA1C-213ENST00000399629 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 TRPM2O94759 1503 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 GNA11P29992 359 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 CBX1P83916 185 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 CDAN1Q8IWY9 1227 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 HAUS7Q99871 368 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 MAK16Q9BXY0 300 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC50Q8IVM0 306 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 STRN3Q13033 797 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 FLAD1Q8NFF5 587 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 AS3MTQ9HBK9 375 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 RXRBP28702 533 aa13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-213ENST00000399629 SYCE3A1L190 88 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 FBLN1P23142 703 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 STX1AQ16623 288 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 UBXN4Q92575 508 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 KAT6BQ8WYB5 2073 aa13.69□□□□□ -0.22
CACNA1C-213ENST00000399629 A0A1W2PRG0 241 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 CHMP2AO43633 222 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 DNM2P50570 870 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 TMCO3Q6UWJ1 677 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms