RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PTPRMP28827 1452 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SCRN1Q12765 414 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 MCM6Q14566 821 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KARSQ15046 597 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IP6K1Q92551 441 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 XBP1P17861 261 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 FANCCQ00597 558 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 AP5Z1O43299 807 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KIF5CO60282 957 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 EVCP57679 992 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 METTL24Q5JXM2 366 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SASH1O94885 1247 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ZNF202O95125 648 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CYP21A2P08686 494 aa12.82□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 REREQ9P2R6 1566 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 USP27XA6NNY8 438 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KCNA6P17658 529 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 LTKP29376 864 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 FAM193AP78312 1265 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 GCKRQ14397 625 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ATL3Q6DD88 541 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TDO2P48775 406 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 MYL5Q02045 173 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TOB2Q14106 344 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CRB1P82279 1406 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ATP5JP18859 108 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 RESTQ13127 1097 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PTPN21Q16825 1174 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 BRMS1Q9HCU9 246 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 AKAP2Q9Y2D5 859 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
CSGALNACT1-202ENST00000397998 RNF113AO15541 343 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NDUFA8P51970 172 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 FBXO38Q6PIJ6 1188 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 USP6P35125 1406 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 GOLGA6L9A6NEM1 432 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 EVA1CP58658 441 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TMEM67Q5HYA8 995 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ANO1Q5XXA6 986 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 E7EWF7 191 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SPECC1Q5M775 1068 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NAPBQ9H115 298 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PFKFB2O60825 505 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ADALQ6DHV7 355 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PRDM4Q9UKN5 801 aa12.79□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ALKQ9UM73 1620 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NAP1L1P55209 391 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 RUFY1Q96T51 708 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 METTL22Q9BUU2 404 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms