RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 LRRC59Q96AG4 307 aaKnown RBP8.15□□□□□ -1.11
UPF2-203ENST00000397053 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.15□□□□□ -1.11
UPF2-203ENST00000397053 V9GYY5 206 aaPredicted RBP8.15□□□□□ -1.11
UPF2-203ENST00000397053 ATP2A2P16615 1042 aaKnown RBP8.15□□□□□ -1.11
UPF2-203ENST00000397053 PDE6BP35913 854 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 IDI1Q13907 227 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 EAPPQ56P03 285 aaPredicted RBP8.15□□□□□ -1.11
UPF2-203ENST00000397053 CNBD1Q8NA66 436 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 LMBR1Q8WVP7 490 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 ZSWIM4Q9H7M6 989 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 PIK3R4Q99570 1358 aa8.15□□□□□ -1.11
UPF2-203ENST00000397053 NCOA2Q15596 1464 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 TRIM75PA6NK02 468 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 GIPC1O14908 333 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 IL2RBP14784 551 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 GNG11P61952 73 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 CCDC114Q96M63 670 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 SBNO2Q9Y2G9 1366 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 GJB2P29033 226 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 BAG6P46379 1132 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 KIF22Q14807 665 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
UPF2-203ENST00000397053 MAK16Q9BXY0 300 aaKnown RBP8.14□□□□□ -1.11
UPF2-203ENST00000397053 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
UPF2-203ENST00000397053 CD109Q6YHK3 1445 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 ESPNB1AK53 854 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 FCHSD1Q86WN1 690 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 TOP2AP11388 1531 aaKnown RBP8.14□□□□□ -1.11
UPF2-203ENST00000397053 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 KIAA1107Q9UPP5 1409 aa8.14□□□□□ -1.11
UPF2-203ENST00000397053 POLR3GO15318 223 aaPredicted RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 DAPK3O43293 454 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 CRCPO75575 148 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 AFG3L2Q9Y4W6 797 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 PTGS1P23219 599 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 IRX3P78415 501 aaPredicted RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 FAM47CQ5HY64 1035 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 CFAP157Q5JU67 520 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 GABPB2Q8TAK5 448 aaPredicted RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 CTAGE1Q96RT6 745 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 GABPAQ06546 454 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 SLFN5Q08AF3 891 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 PPP1R9BQ96SB3 815 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 ARHGEF10LQ9HCE6 1279 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 USP25Q9UHP3 1055 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 DAPK1P53355 1430 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 ATP2C2O75185 946 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 TACC1O75410 805 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 ARID4AP29374 1257 aaPredicted RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 SMTNP53814 917 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 TRPC3Q13507 836 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 TEX11Q8IYF3 940 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 HACE1Q8IYU2 909 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 TBC1D31Q96DN5 1066 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 NOX5Q96PH1 765 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
UPF2-203ENST00000397053 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 ACEP12821 1306 aa8.13□□□□□ -1.11
UPF2-203ENST00000397053 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 HSF2BPO75031 334 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 GNAT2P19087 354 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 CCT6AP40227 531 aaKnown RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 CUL4BQ13620 913 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 CHST3Q7LGC8 479 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 MIGA1Q8NAN2 632 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 IFT74Q96LB3 600 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 C16orf45Q96MC5 204 aaPredicted RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 AZI2Q9H6S1 392 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 CCDC169A6NNP5 214 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
UPF2-203ENST00000397053 CAVIN2O95810 425 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 ZYXQ15942 572 aaKnown RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 NSMFQ6X4W1 530 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 RHPN1Q8TCX5 695 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 TTC14Q96N46 770 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 NSRP1Q9H0G5 558 aaKnown RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 UFL1O94874 794 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 HSP90AA4PQ58FG1 418 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 NSMCE1Q8WV22 266 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 LEO1Q8WVC0 666 aaPredicted RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 CACYBPQ9HB71 228 aaKnown RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 CAMSAP2Q08AD1 1489 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 E7EVH7 732 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 H0YIN7 160 aa8.12□□□□□ -1.11
UPF2-203ENST00000397053 IRX5P78411 483 aaPredicted RBP8.12□□□□□ -1.11
UPF2-203ENST00000397053 ARHGEF6Q15052 776 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms