RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
MCF2L-208ENST00000397030 BRF1Q92994 677 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 PYM1Q9BRP8 204 aaKnown RBP19.82■□□□□ 0.76
MCF2L-208ENST00000397030 TCP10Q12799 353 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC102BQ68D86 513 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 ANO3Q9BYT9 981 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 PA2G4Q9UQ80 394 aaKnown RBP19.82■□□□□ 0.76
MCF2L-208ENST00000397030 PLCG2P16885 1265 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 RXRAP19793 462 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 MARCKSP29966 332 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 MAK16Q9BXY0 300 aaKnown RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC175P0C221 793 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 ATXN8OSP0DMR3 200 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 KRT9P35527 623 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 MYCP01106 439 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC169A6NNP5 214 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 SMCR8Q8TEV9 937 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 ZBTB24O43167 697 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 AKR1B10O60218 316 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 STX1AQ16623 288 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 MTERF4Q7Z6M4 381 aaKnown RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 FAM107BQ9H098 131 aa19.81■□□□□ 0.76
MCF2L-208ENST00000397030 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-208ENST00000397030 DHX58Q96C10 678 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 IFI16Q16666 785 aaKnown RBP19.8■□□□□ 0.76
MCF2L-208ENST00000397030 KANK3Q6NY19 840 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 TEX11Q8IYF3 940 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 CEP83Q9Y592 693 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 PDIA4P13667 645 aaKnown RBP19.8■□□□□ 0.76
MCF2L-208ENST00000397030 USP21Q9UK80 565 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 ATP2C2O75185 946 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 KIF22Q14807 665 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 GNAQP50148 359 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 BIRC3Q13489 604 aa19.8■□□□□ 0.76
MCF2L-208ENST00000397030 POLR3GO15318 223 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-208ENST00000397030 CTAGE5O15320 804 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 ZWINTO95229 277 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 MCM3P25205 808 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC184Q52MB2 194 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 DPP8Q6V1X1 898 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-208ENST00000397030 M0QZ92 97 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 SYKP43405 635 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 DCAF17Q5H9S7 520 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-208ENST00000397030 PARP1P09874 1014 aaKnown RBP19.79■□□□□ 0.76
MCF2L-208ENST00000397030 KAT6BQ8WYB5 2073 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 Q6ZUG5 572 aa19.79■□□□□ 0.76
MCF2L-208ENST00000397030 BAG6P46379 1132 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 SH2D4AQ9H788 454 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 CTR9Q6PD62 1173 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 PAG1Q9NWQ8 432 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 KRT79Q5XKE5 535 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 RNF169Q8NCN4 708 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 SSFA2P28290 1259 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 MAPK8IP2Q13387 824 aaPredicted RBP19.78■□□□□ 0.76
MCF2L-208ENST00000397030 CCDC65Q8IXS2 484 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 PAGR1Q9BTK6 254 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 KRT2P35908 639 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
MCF2L-208ENST00000397030 NIM1KQ8IY84 436 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 CPXCR1Q8N123 301 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 ARHGEF10LQ9HCE6 1279 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 FAM169AQ9Y6X4 670 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 PPIP5K1Q6PFW1 1433 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 GGA1Q9UJY5 639 aa19.77■□□□□ 0.76
MCF2L-208ENST00000397030 GRM8O00222 908 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 MSANTD4Q8NCY6 345 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 GOLGA1Q92805 767 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 PLVAPQ9BX97 442 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 CRCPO75575 148 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 C20orf194Q5TEA3 1177 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 ZBTB9Q96C00 473 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 USH1GQ495M9 461 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 FNBP1Q96RU3 617 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 GAS8O95995 478 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 MCMDC2Q4G0Z9 681 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
MCF2L-208ENST00000397030 TRIM27P14373 513 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 TMTC2Q8N394 836 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 KIF18AQ8NI77 898 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 TXNDC16Q9P2K2 825 aa19.76■□□□□ 0.75
MCF2L-208ENST00000397030 FANCAO15360 1455 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 DAPK3O43293 454 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 IRX3P78415 501 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-208ENST00000397030 FAM200AQ8TCP9 573 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■□□□ 13.3
MCF2L-208ENST00000397030 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 CCDC114Q96M63 670 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 TIGD1Q96MW7 591 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 SMIM23A6NLE4 172 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 PPP2R5CQ13362 524 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 PPP1R21Q6ZMI0 780 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms