RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 TDRD7Q8NHU6 1098 aaKnown RBP13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 PFKFB2O60825 505 aa13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 ADD1P35611 737 aaKnown RBP13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 SKILP12757 684 aa13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
ATP2A1-202ENST00000395503 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 SMC2O95347 1197 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 STK38Q15208 465 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 ATG9AQ7Z3C6 839 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 OSBP2Q969R2 916 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 MAST3O60307 1309 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 FOXO4P98177 505 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 DENND2AQ9ULE3 1009 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 CLIC4Q9Y696 253 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 STX1AQ16623 288 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
ATP2A1-202ENST00000395503 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 CPLX1O14810 134 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 APPP05067 770 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 IQCB1Q15051 598 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 HSP90AA4PQ58FG1 418 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 NDUFA8P51970 172 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 SNW1Q13573 536 aaKnown RBP13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 SCARF1Q14162 830 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 TTC39AQ5SRH9 613 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 ZNF396Q96N95 335 aaPredicted RBP13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
ATP2A1-202ENST00000395503 CEP135Q66GS9 1140 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 LRRC8AQ8IWT6 810 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 RCOR1Q9UKL0 485 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 RNF113AO15541 343 aaKnown RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 NCBP1Q09161 790 aaKnown RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 ORC3Q9UBD5 711 aaPredicted RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 A0A0G2JS52 829 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 FDPSP14324 419 aaKnown RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 GPTP24298 496 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 DPCR1Q3MIW9 517 aa13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
ATP2A1-202ENST00000395503 ATF3P18847 181 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 PRC1O43663 620 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 FAM160A1Q05DH4 1040 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 MEGF6O75095 1541 aa13.54□□□□□ -0.24
ATP2A1-202ENST00000395503 EYA2O00167 538 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 ZAP70P43403 619 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 CASP7P55210 303 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 PRDM4Q9UKN5 801 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 PDIA4P13667 645 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 INCENPQ9NQS7 918 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 FGAP02671 866 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
ATP2A1-202ENST00000395503 MYL10Q9BUA6 226 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms