RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 CCDC69A6NI79 296 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 ERC2O15083 957 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 AFF2P51816 1311 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 RAD50Q92878 1312 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-202ENST00000395358 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 N4BP2L2Q92802 583 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 MED4Q9NPJ6 270 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 INPP5BP32019 993 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 EXOC4Q96A65 974 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 PDILTQ8N807 584 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 CARD6Q9BX69 1037 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
RAPGEF3-202ENST00000395358 KRT85P78386 507 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 RBBP5Q15291 538 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 CRB1P82279 1406 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 NEDD9Q14511 834 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 VAMP4O75379 141 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 GNAI3P08754 354 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 TYRO3Q06418 890 aa13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-202ENST00000395358 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.31
RAPGEF3-202ENST00000395358 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.31
RAPGEF3-202ENST00000395358 NUCB1Q02818 461 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 RABEP2Q9H5N1 569 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 OTUD6BQ8N6M0 293 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
RAPGEF3-202ENST00000395358 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 CCDC73Q6ZRK6 1079 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 CLEC17AQ6ZS10 378 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 SUDS3Q9H7L9 328 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 PES1O00541 588 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 FLIIQ13045 1269 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 TRDNQ13061 729 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 KCNF1Q9H3M0 494 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 ODF2LQ9ULJ1 636 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZNF75DP51815 510 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 GSDMDP57764 484 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 NUP133Q8WUM0 1156 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 DNAJC25Q9H1X3 360 aa13.07□□□□□ -0.32
RAPGEF3-202ENST00000395358 KDRP35968 1356 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 PTPRCP08575 1304 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 NAIF1Q69YI7 327 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 SDF4Q9BRK5 362 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 H3BQV1 296 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 HOXB7P09629 217 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 SETSIPP0DME0 302 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 DDIT3P35638 169 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 GNG11P61952 73 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZNF521Q96K83 1311 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CYP27B1O15528 508 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CAPN7Q9Y6W3 813 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 TMCO5BA8MYB1 307 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 IPO7O95373 1038 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 SCP2P22307 547 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms