RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
VSIR-201ENST00000394957 GOLGA8BA8MQT2 603 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 RLBP1P12271 317 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 ZNF804AQ7Z570 1209 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
VSIR-201ENST00000394957 USP25Q9UHP3 1055 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 HDAC9Q9UKV0 1011 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 CEP170BQ9Y4F5 1589 aaPredicted RBP16.75■□□□□ 0.27
VSIR-201ENST00000394957 IFIT3O14879 490 aaKnown RBP16.75■□□□□ 0.27
VSIR-201ENST00000394957 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
VSIR-201ENST00000394957 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 MYO1BO43795 1136 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
VSIR-201ENST00000394957 RAB11FIP4Q86YS3 637 aa16.75■□□□□ 0.27
VSIR-201ENST00000394957 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
VSIR-201ENST00000394957 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 STX6O43752 255 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 GJB2P29033 226 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 SATB1Q01826 763 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 C16orf71Q8IYS4 520 aaPredicted RBP16.74■□□□□ 0.27
VSIR-201ENST00000394957 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
VSIR-201ENST00000394957 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
VSIR-201ENST00000394957 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
VSIR-201ENST00000394957 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
VSIR-201ENST00000394957 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
VSIR-201ENST00000394957 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 CCDC172P0C7W6 258 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 PDE1AP54750 535 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 LUC7LQ9NQ29 371 aaKnown RBP16.73■□□□□ 0.27
VSIR-201ENST00000394957 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
VSIR-201ENST00000394957 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
VSIR-201ENST00000394957 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
VSIR-201ENST00000394957 LOC102724159A0A0B4J2E5 919 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 ZNF76P36508 570 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 PWP2Q15269 919 aaKnown RBP16.72■□□□□ 0.27
VSIR-201ENST00000394957 PDE8AO60658 829 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
VSIR-201ENST00000394957 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
VSIR-201ENST00000394957 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
VSIR-201ENST00000394957 MADDQ8WXG6 1647 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 CCDC181Q5TID7 509 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 KIF1CO43896 1103 aaKnown RBP16.72■□□□□ 0.27
VSIR-201ENST00000394957 SIK1P57059 783 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
VSIR-201ENST00000394957 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 NCAPGQ9BPX3 1015 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
VSIR-201ENST00000394957 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 TMX3Q96JJ7 454 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
VSIR-201ENST00000394957 SPATA31A6Q5VVP1 1343 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
VSIR-201ENST00000394957 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
VSIR-201ENST00000394957 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.26
VSIR-201ENST00000394957 BIN1O00499 593 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 SEPT12Q8IYM1 358 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.267e-7■■■■■ 48.1
VSIR-201ENST00000394957 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 AFF2P51816 1311 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 ZBTB22O15209 634 aa16.7■□□□□ 0.26
VSIR-201ENST00000394957 ORC3Q9UBD5 711 aaPredicted RBP16.7■□□□□ 0.26
VSIR-201ENST00000394957 BRF1Q92994 677 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
VSIR-201ENST00000394957 H0YIN7 160 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
VSIR-201ENST00000394957 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
VSIR-201ENST00000394957 MYO6Q9UM54 1294 aa16.69■□□□□ 0.26
VSIR-201ENST00000394957 G2E3Q7L622 706 aa16.68■□□□□ 0.26
VSIR-201ENST00000394957 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
VSIR-201ENST00000394957 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
VSIR-201ENST00000394957 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 UBXN4Q92575 508 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 RBM6P78332 1123 aaKnown RBP16.67■□□□□ 0.26
VSIR-201ENST00000394957 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 ICE2Q659A1 982 aa16.67■□□□□ 0.26
VSIR-201ENST00000394957 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms