RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
ATG4A-205ENST00000394892 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
ATG4A-205ENST00000394892 ZNF609O15014 1411 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 ADM5C9JUS6 153 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 H7C1D1 291 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 CCER2I3L3R5 266 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 TAF5LO75529 589 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
ATG4A-205ENST00000394892 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 HHIPL1Q96JK4 782 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 UTYO14607 1347 aa11.26□□□□□ -0.61
ATG4A-205ENST00000394892 IGHMBP2P38935 993 aaKnown RBP11.25□□□□□ -0.61
ATG4A-205ENST00000394892 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 SAPCD2Q86UD0 394 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
ATG4A-205ENST00000394892 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 ZNF804BA4D1E1 1349 aa11.25□□□□□ -0.61
ATG4A-205ENST00000394892 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 AOC2O75106 756 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-205ENST00000394892 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
ATG4A-205ENST00000394892 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
ATG4A-205ENST00000394892 SLC34A2O95436 690 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 NOGQ13253 232 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 IFIT5Q13325 482 aaKnown RBP11.23□□□□□ -0.61
ATG4A-205ENST00000394892 SCARF1Q14162 830 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
ATG4A-205ENST00000394892 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
ATG4A-205ENST00000394892 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 CERS5Q8N5B7 392 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 MPHOSPH8Q99549 860 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
ATG4A-205ENST00000394892 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
ATG4A-205ENST00000394892 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 RGS19P49795 217 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 AOX1Q06278 1338 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 MIER1Q8N108 512 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
ATG4A-205ENST00000394892 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
ATG4A-205ENST00000394892 CD209Q9NNX6 404 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
ATG4A-205ENST00000394892 PTPRCP08575 1304 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 G3V3G9 751 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 LRRC24Q50LG9 513 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 STRIP1Q5VSL9 837 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 ANGEL2Q5VTE6 544 aaKnown RBP11.21□□□□□ -0.61
ATG4A-205ENST00000394892 LDHAL6AQ6ZMR3 332 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
ATG4A-205ENST00000394892 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
ATG4A-205ENST00000394892 PLIN1O60240 522 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 RFX5P48382 616 aaPredicted RBP11.2□□□□□ -0.62
ATG4A-205ENST00000394892 GTF2IP78347 998 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 DGKZQ13574 1117 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
ATG4A-205ENST00000394892 ZNF646O15015 1829 aaPredicted RBP11.2□□□□□ -0.62
ATG4A-205ENST00000394892 WNT10BO00744 389 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 IL1R1P14778 569 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 RARSP54136 660 aaKnown RBP11.19□□□□□ -0.62
ATG4A-205ENST00000394892 HUNKP57058 714 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 VGLL2Q8N8G2 317 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 C2orf69Q8N8R5 385 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
ATG4A-205ENST00000394892 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 FAM84BQ96KN1 310 aaPredicted RBP11.19□□□□□ -0.62
ATG4A-205ENST00000394892 SMC4Q9NTJ3 1288 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
ATG4A-205ENST00000394892 JAG2Q9Y219 1238 aa11.19□□□□□ -0.62
ATG4A-205ENST00000394892 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms