RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PCDHGA2-201ENST00000394576 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
PCDHGA2-201ENST00000394576 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
PCDHGA2-201ENST00000394576 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
PCDHGA2-201ENST00000394576 HIBADHP31937 336 aaKnown RBP12.65□□□□□ -0.39
PCDHGA2-201ENST00000394576 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 CCAR1Q8IX12 1150 aaKnown RBP12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 WDR66Q8TBY9 1149 aa12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA2-201ENST00000394576 A0A1B0GUL7 405 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 UFL1O94874 794 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 STK3Q13188 491 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 KIF2CQ99661 725 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 ME1P48163 572 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 ANAPC15P60006 121 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 NUP133Q8WUM0 1156 aa12.63□□□□□ -0.39
PCDHGA2-201ENST00000394576 ZNF771Q7L3S4 317 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 KRT23Q9C075 422 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 FILIP1LQ4L180 1135 aa12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
PCDHGA2-201ENST00000394576 SMC2O95347 1197 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 CEBPZQ03701 1054 aaKnown RBP12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 TXLNAP40222 546 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 ACBD3Q9H3P7 528 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 CIAO1O76071 339 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 NOL7Q9UMY1 257 aaKnown RBP12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 PDILTQ8N807 584 aa12.61□□□□□ -0.39
PCDHGA2-201ENST00000394576 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 TRAF1Q13077 416 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 MPNDQ8N594 471 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 BBOX1O75936 387 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 SERPINB2P05120 415 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 NLRP10Q86W26 655 aa12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA2-201ENST00000394576 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 KIF5BP33176 963 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 IFIT3O14879 490 aaKnown RBP12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 C2CD5Q86YS7 1000 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 TNNI2P48788 182 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 ESR2Q92731 530 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
PCDHGA2-201ENST00000394576 SMARCE1Q969G3 411 aa12.58□□□□□ -0.39
PCDHGA2-201ENST00000394576 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.39
PCDHGA2-201ENST00000394576 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 SYCE3A1L190 88 aa12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 MCM5P33992 734 aa12.58□□□□□ -0.4
PCDHGA2-201ENST00000394576 TIMM10P62072 90 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms