RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 PSME4Q14997 1843 aa14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 PTPN12Q05209 780 aaKnown RBP14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 SLC4A8Q2Y0W8 1093 aa14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 RSBN1LQ6PCB5 846 aaPredicted RBP14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 LAMB1P07942 1786 aa14.18□□□□□ -0.14
VTI1BP2-201ENST00000394154 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 G3V3G9 751 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 USP17L8P0C7I0 530 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 GPSM2P81274 684 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 DCTN1Q14203 1278 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 SLC9C1Q4G0N8 1177 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 ZC3H12CQ9C0D7 883 aaKnown RBP14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 SCAF8Q9UPN6 1271 aaKnown RBP14.17□□□□□ -0.14
VTI1BP2-201ENST00000394154 IL16Q14005 1332 aa14.16□□□□□ -0.14
VTI1BP2-201ENST00000394154 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
VTI1BP2-201ENST00000394154 TBC1D16Q8TBP0 767 aa14.16□□□□□ -0.14
VTI1BP2-201ENST00000394154 MIS18AQ9NYP9 233 aa14.16□□□□□ -0.14
VTI1BP2-201ENST00000394154 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 HSP90AB3PQ58FF7 597 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 GMLQ99445 158 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 MYH16Q9H6N6 1097 aa14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
VTI1BP2-201ENST00000394154 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 ZBTB48P10074 688 aaPredicted RBP14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 SP3Q02447 781 aa14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 LDLRAD1Q5T700 205 aa14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 DPF3Q92784 378 aa14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 CELF1Q92879 486 aaKnown RBP14.14□□□□□ -0.15
VTI1BP2-201ENST00000394154 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
VTI1BP2-201ENST00000394154 CRHR2Q13324 411 aa14.13□□□□□ -0.15
VTI1BP2-201ENST00000394154 ARHGEF6Q15052 776 aa14.13□□□□□ -0.15
VTI1BP2-201ENST00000394154 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
VTI1BP2-201ENST00000394154 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 PRKG1Q13976 671 aa14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 NBPF9Q3BBW0 867 aa14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 SLC10A4Q96EP9 437 aa14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
VTI1BP2-201ENST00000394154 GNAI1P63096 354 aa14.11□□□□□ -0.15
VTI1BP2-201ENST00000394154 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
VTI1BP2-201ENST00000394154 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
VTI1BP2-201ENST00000394154 WNK4Q96J92 1243 aa14.11□□□□□ -0.15
VTI1BP2-201ENST00000394154 PTCH2Q9Y6C5 1203 aa14.11□□□□□ -0.15
VTI1BP2-201ENST00000394154 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 UFL1O94874 794 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 NEFLP07196 543 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 CAP1Q01518 475 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 APOBEC3FQ8IUX4 373 aaKnown RBP14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 COL4A1P02462 1669 aa14.1□□□□□ -0.15
VTI1BP2-201ENST00000394154 WNT10BO00744 389 aa14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 OGFOD1Q8N543 542 aa14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 HTATIP2Q9BUP3 242 aa14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 COL1A1P02452 1464 aaPredicted RBP14.09□□□□□ -0.15
VTI1BP2-201ENST00000394154 WTIPA6NIX2 430 aaPredicted RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 SOX1O00570 391 aaPredicted RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 MYCP01106 439 aaPredicted RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 RPS8P62241 208 aaKnown RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 PDIA6Q15084 440 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 MAP3K11Q16584 847 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 PODNQ7Z5L7 613 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 ANKIB1Q9P2G1 1089 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 LAS1LQ9Y4W2 734 aaKnown RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 ZNF646O15015 1829 aaPredicted RBP14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 LAMA3Q16787 3333 aa14.08□□□□□ -0.16
VTI1BP2-201ENST00000394154 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 MMP14P50281 582 aa14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 ANKRD13DQ6ZTN6 518 aa14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 LRCH3Q96II8 777 aa14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 COL25A1Q9BXS0 654 aaPredicted RBP14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
VTI1BP2-201ENST00000394154 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 ZNF853P0CG23 659 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 SHISA4Q96DD7 197 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 CLMNQ96JQ2 1002 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 MYO3BQ8WXR4 1341 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 FANCIQ9NVI1 1328 aa14.06□□□□□ -0.16
VTI1BP2-201ENST00000394154 TESPA1A2RU30 521 aaPredicted RBP14.05□□□□□ -0.16
VTI1BP2-201ENST00000394154 ZBTB7BO15156 539 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms