RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 SCARF1Q14162 830 aa20.75■□□□□ 0.91
FGFR4-203ENST00000393648 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
FGFR4-203ENST00000393648 C17orf53Q8N3J3 647 aaPredicted RBP20.75■□□□□ 0.91
FGFR4-203ENST00000393648 KBTBD3Q8NAB2 608 aa20.75■□□□□ 0.91
FGFR4-203ENST00000393648 SNAP23O00161 211 aa20.74■□□□□ 0.91
FGFR4-203ENST00000393648 AK2P54819 239 aa20.74■□□□□ 0.91
FGFR4-203ENST00000393648 SEC31BQ9NQW1 1179 aa20.74■□□□□ 0.91
FGFR4-203ENST00000393648 MED23Q9ULK4 1368 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 TAF5LO75529 589 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 BICDL1Q6ZP65 573 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
FGFR4-203ENST00000393648 SPATA31A6Q5VVP1 1343 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 TTC14Q96N46 770 aa20.73■□□□□ 0.91
FGFR4-203ENST00000393648 SLC27A2O14975 620 aa20.72■□□□□ 0.91
FGFR4-203ENST00000393648 MCM2P49736 904 aa20.72■□□□□ 0.91
FGFR4-203ENST00000393648 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
FGFR4-203ENST00000393648 CCDC158Q5M9N0 1113 aa20.72■□□□□ 0.91
FGFR4-203ENST00000393648 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
FGFR4-203ENST00000393648 RUFY3Q7L099 469 aa20.71■□□□□ 0.91
FGFR4-203ENST00000393648 GTPBP4Q9BZE4 634 aaKnown RBP20.71■□□□□ 0.91
FGFR4-203ENST00000393648 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
FGFR4-203ENST00000393648 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
FGFR4-203ENST00000393648 AFF2P51816 1311 aa20.71■□□□□ 0.91
FGFR4-203ENST00000393648 FBXO3Q9UK99 471 aa20.7■□□□□ 0.9
FGFR4-203ENST00000393648 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
FGFR4-203ENST00000393648 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
FGFR4-203ENST00000393648 MCMDC2Q4G0Z9 681 aa20.7■□□□□ 0.9
FGFR4-203ENST00000393648 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
FGFR4-203ENST00000393648 ZDHHC9Q9Y397 364 aa20.7■□□□□ 0.9
FGFR4-203ENST00000393648 CUL4AQ13619 759 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
FGFR4-203ENST00000393648 LARGE1O95461 756 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 NTSR2O95665 410 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 ZAP70P43403 619 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
FGFR4-203ENST00000393648 AMIGO3Q86WK7 504 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
FGFR4-203ENST00000393648 KIF20AO95235 890 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 VGLL2Q8N8G2 317 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 KCNB2Q92953 911 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 CYP46A1Q9Y6A2 500 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 ANKRD36CQ5JPF3 1778 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 ZSWIM6Q9HCJ5 1215 aa20.68■□□□□ 0.9
FGFR4-203ENST00000393648 SRP68Q9UHB9 627 aaKnown RBP20.68■□□□□ 0.9
FGFR4-203ENST00000393648 PDE8BO95263 885 aa20.67■□□□□ 0.9
FGFR4-203ENST00000393648 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
FGFR4-203ENST00000393648 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
FGFR4-203ENST00000393648 CCNL1Q9UK58 526 aaPredicted RBP20.66■□□□□ 0.9
FGFR4-203ENST00000393648 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 GNPATO15228 680 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 MCAMP43121 646 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 C3orf67Q6ZVT6 689 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 CCDC24Q8N4L8 307 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 LIMCH1Q9UPQ0 1083 aa20.66■□□□□ 0.9
FGFR4-203ENST00000393648 NOLC1Q14978 699 aaKnown RBP eCLIP20.65■□□□□ 0.9
FGFR4-203ENST00000393648 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
FGFR4-203ENST00000393648 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
FGFR4-203ENST00000393648 KIF3AQ9Y496 699 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 ERFEQ4G0M1 354 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 USPL1Q5W0Q7 1092 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 PRIMPOLQ96LW4 560 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 ZNF652Q9Y2D9 606 aa20.65■□□□□ 0.9
FGFR4-203ENST00000393648 PHKA1P46020 1223 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 ZMYM1Q5SVZ6 1142 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 TBC1D9BQ66K14 1250 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 OSBP2Q969R2 916 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.9
FGFR4-203ENST00000393648 RNF113AO15541 343 aaKnown RBP20.64■□□□□ 0.89
FGFR4-203ENST00000393648 FOXD4L6Q3SYB3 417 aaPredicted RBP20.64■□□□□ 0.89
FGFR4-203ENST00000393648 TPRNQ4KMQ1 711 aa20.64■□□□□ 0.89
FGFR4-203ENST00000393648 FOXD4L3Q6VB84 417 aaPredicted RBP20.64■□□□□ 0.89
FGFR4-203ENST00000393648 TM6SF1Q9BZW5 370 aa20.64■□□□□ 0.89
FGFR4-203ENST00000393648 MAST3O60307 1309 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 M0R2C6 588 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 CYP21A2P08686 494 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 HMGN5P82970 282 aaKnown RBP20.63■□□□□ 0.89
FGFR4-203ENST00000393648 WASHC4Q2M389 1173 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 TSPY26PQ9H489 355 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 VGLL3A8MV65 326 aa20.63■□□□□ 0.89
FGFR4-203ENST00000393648 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.891e-5■□□□□ 9.3
FGFR4-203ENST00000393648 INTS4Q96HW7 963 aaKnown RBP20.63■□□□□ 0.89
FGFR4-203ENST00000393648 CCDC152Q4G0S7 254 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 CCDC83Q8IWF9 413 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 PDCL2Q8N4E4 241 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 NECAB1Q8N987 351 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 MYH3P11055 1940 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 ZBTB22O15209 634 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 CCDC102BQ68D86 513 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 BLOC1S2Q6QNY1 142 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 WTIPA6NIX2 430 aaPredicted RBP20.62■□□□□ 0.89
FGFR4-203ENST00000393648 PHF14O94880 888 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 PIBF1Q8WXW3 757 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 HELLSQ9NRZ9 838 aa20.62■□□□□ 0.89
FGFR4-203ENST00000393648 CGNQ9P2M7 1197 aaKnown RBP20.62■□□□□ 0.89
FGFR4-203ENST00000393648 TPCN1Q9ULQ1 816 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms