RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
CASP3-202ENST00000393585 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
CASP3-202ENST00000393585 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
CASP3-202ENST00000393585 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
CASP3-202ENST00000393585 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
CASP3-202ENST00000393585 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 AKAP11Q9UKA4 1901 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 GNPATO15228 680 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
CASP3-202ENST00000393585 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 COL4A1P02462 1669 aa13.1□□□□□ -0.31
CASP3-202ENST00000393585 FGFR2P21802 821 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 TBC1D9BQ66K14 1250 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 LPIN2Q92539 896 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 ZSCAN31Q96LW9 406 aaPredicted RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 KRT32Q14532 448 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
CASP3-202ENST00000393585 DDX49Q9Y6V7 483 aaKnown RBP13.09□□□□□ -0.31
CASP3-202ENST00000393585 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 PTMSP20962 102 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 LAMB2P55268 1798 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 TAF1P21675 1872 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 GJB2P29033 226 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 STK3Q13188 491 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 SKOR2Q2VWA4 1001 aaPredicted RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
CASP3-202ENST00000393585 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.32
CASP3-202ENST00000393585 MYH7P12883 1935 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 FOXP2O15409 715 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 IDH1O75874 414 aaKnown RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 SLC5A1P13866 664 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 SYT1P21579 422 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 CHRNDQ07001 517 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 Q6ZUG5 572 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
CASP3-202ENST00000393585 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
CASP3-202ENST00000393585 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
CASP3-202ENST00000393585 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
CASP3-202ENST00000393585 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
CASP3-202ENST00000393585 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 GPAA1O43292 621 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 STX6O43752 255 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 ZPR1O75312 459 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 PHF14O94880 888 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 HAND2P61296 217 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
CASP3-202ENST00000393585 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
CASP3-202ENST00000393585 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
CASP3-202ENST00000393585 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 ADD2P35612 726 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 BCAMP50895 628 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
CASP3-202ENST00000393585 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
CASP3-202ENST00000393585 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
CASP3-202ENST00000393585 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
CASP3-202ENST00000393585 E7EWF7 191 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms