RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 RASA3Q14644 834 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 ARHGAP44Q17R89 818 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 FAM133BQ5BKY9 247 aaKnown RBP3.7□□□□□ -1.82
PHF3-202ENST00000393387 CCDC62Q6P9F0 684 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 DPH6Q7L8W6 267 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 ARHGAP18Q8N392 663 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 FSIP1Q8NA03 581 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.7□□□□□ -1.822e-6■■■■■ 60.5
PHF3-202ENST00000393387 LRRC45Q96CN5 670 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 CTAGE1Q96RT6 745 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 SH3GL2Q99962 352 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 RNPEPQ9H4A4 650 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 RRP15Q9Y3B9 282 aaKnown RBP3.7□□□□□ -1.82
PHF3-202ENST00000393387 EID1Q9Y6B2 187 aa3.7□□□□□ -1.82
PHF3-202ENST00000393387 PHLDB1Q86UU1 1377 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 MAN1A2O60476 641 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SUPT3HO75486 399 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 KRT7P08729 469 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 GNAT2P19087 354 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PDCP20941 246 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 NUCB1Q02818 461 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PLCB4Q15147 1175 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 TMEM259Q4ZIN3 620 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CABS1Q96KC9 395 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PANK3Q9H999 370 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 HELLSQ9NRZ9 838 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 GOLGA8AA7E2F4 631 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 GOLGA8BA8MQT2 603 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PDHA1P08559 390 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PDE6AP16499 860 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CCDC15Q0P6D6 951 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 PPP2R5DQ14738 602 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 BRD3Q15059 726 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 STX1AQ16623 288 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CCDC57Q2TAC2 916 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 LMBRD2Q68DH5 695 aaPredicted RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 AOPEPQ8N6M6 819 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 KCNV2Q8TDN2 545 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 TERF2IPQ9NYB0 399 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SMAPO00193 183 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 RIPK4P57078 832 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 GSDMDP57764 484 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 TAF11Q15544 211 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 OLFML2BQ68BL8 750 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CCDC150Q8NCX0 1101 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CNNM3Q8NE01 707 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 BCAR3O75815 825 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SYT1P21579 422 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CASP2P42575 452 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 ACBD5Q5T8D3 534 aaPredicted RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 SH3GL3Q99963 347 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CAPN9O14815 690 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CTAGE5O15320 804 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 RNF40O75150 1001 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SURF6O75683 361 aaKnown RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 BASP1P80723 227 aaKnown RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 GNPTABQ3T906 1256 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 VPS36Q86VN1 386 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 NLRP13Q86W25 1043 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CCDC89Q8N998 374 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 CTCFLQ8NI51 663 aaPredicted RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 PNISRQ8TF01 805 aaKnown RBP3.69□□□□□ -1.82
PHF3-202ENST00000393387 CEP19Q96LK0 163 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SPAG5Q96R06 1193 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 DNAJC25Q9H1X3 360 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 NKIRAS1Q9NYS0 192 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 SFMBT1Q9UHJ3 866 aa3.69□□□□□ -1.82
PHF3-202ENST00000393387 DTNBO60941 627 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 RHOBTB1O94844 696 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CARSP49589 748 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCDC102BQ68D86 513 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 OPTNQ96CV9 577 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 UIMC1Q96RL1 719 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 SCINQ9Y6U3 715 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 SMARCA5O60264 1052 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 DIAPH2O60879 1101 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 SEC31AO94979 1220 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 KRT75O95678 551 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 HMOX1P09601 288 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 ARHGAP25P42331 645 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCT5P48643 541 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 UBASH3AP57075 661 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 KCNA1Q09470 495 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 ANKRD1Q15327 319 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCDC85BQ15834 202 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 TRIM22Q8IYM9 498 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 ANKRD35Q8N283 1001 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 USHBP1Q8N6Y0 703 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 MSANTD4Q8NCY6 345 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 PSMB7Q99436 277 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CNPY2Q9Y2B0 182 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 ZKSCAN5Q9Y2L8 839 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 LUC7L3O95232 432 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 MRPS15P82914 257 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 PLCB3Q01970 1234 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 FAM47EQ6ZV65 393 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CFAP61Q8NHU2 1237 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCT6BQ92526 530 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 RPGRIP1Q96KN7 1286 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms