RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 C7orf43Q8WVR3 580 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 NYXQ9GZU5 481 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
CASP4-201ENST00000393150 TJP1Q07157 1748 aa10.55□□□□□ -0.72
CASP4-201ENST00000393150 SAPCD2Q86UD0 394 aa10.55□□□□□ -0.72
CASP4-201ENST00000393150 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
CASP4-201ENST00000393150 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
CASP4-201ENST00000393150 NIP7Q9Y221 180 aaKnown RBP eCLIP10.55□□□□□ -0.72
CASP4-201ENST00000393150 HOXA2O43364 376 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 A1BGP04217 495 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 IL13P35225 146 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 GJA5P36382 358 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 CST9Q5W186 159 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 CIAPIN1Q6FI81 312 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 BCL2L13Q9BXK5 485 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 PANK3Q9H999 370 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
CASP4-201ENST00000393150 HEG1Q9ULI3 1381 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 FAM177BA6PVY3 158 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 GNAT3A8MTJ3 354 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 TRAF5O00463 557 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 HMOX1P09601 288 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 EPS15P42566 896 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 SUPT20HQ8NEM7 779 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 HLA-CQ95604 372 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
CASP4-201ENST00000393150 ZNF496Q96IT1 587 aaPredicted RBP10.53□□□□□ -0.72
CASP4-201ENST00000393150 VPS33BQ9H267 617 aa10.53□□□□□ -0.72
CASP4-201ENST00000393150 SLX4Q8IY92 1834 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 BTBD11A6QL63 1104 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 SOX10P56693 466 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 USP46P62068 366 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 TNIP1Q15025 636 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 MTHFSDQ2M296 383 aaKnown RBP10.52□□□□□ -0.73
CASP4-201ENST00000393150 PPP2R2DQ66LE6 453 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 SAGE1Q9NXZ1 904 aa10.52□□□□□ -0.73
CASP4-201ENST00000393150 ADAMTS7Q9UKP4 1686 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 KLRG2A4D1S0 409 aaPredicted RBP10.51□□□□□ -0.73
CASP4-201ENST00000393150 H7C1D1 291 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 PPIP5K2O43314 1243 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 DIAPH1O60610 1272 aaKnown RBP10.51□□□□□ -0.73
CASP4-201ENST00000393150 CFHP08603 1231 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 HUNKP57058 714 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 PKN2Q16513 984 aaKnown RBP10.51□□□□□ -0.73
CASP4-201ENST00000393150 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
CASP4-201ENST00000393150 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 SCN11AQ9UI33 1791 aa10.51□□□□□ -0.73
CASP4-201ENST00000393150 CASP8AP2Q9UKL3 1982 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 LILRB3O75022 631 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 SNRPA1P09661 255 aaKnown RBP10.5□□□□□ -0.73
CASP4-201ENST00000393150 SCNN1DP51172 638 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 GUCA2AQ02747 115 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 FUT2Q10981 343 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 QPCTQ16769 361 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 RTF1Q92541 710 aaKnown RBP10.5□□□□□ -0.73
CASP4-201ENST00000393150 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 GPRC5DQ9NZD1 345 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 HDAC9Q9UKV0 1011 aa10.5□□□□□ -0.73
CASP4-201ENST00000393150 SOWAHBA6NEL2 793 aa10.49□□□□□ -0.73
CASP4-201ENST00000393150 RFC5P40937 340 aa10.49□□□□□ -0.73
CASP4-201ENST00000393150 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
CASP4-201ENST00000393150 ZNRF3Q9ULT6 936 aa10.49□□□□□ -0.73
CASP4-201ENST00000393150 ANKRD31Q8N7Z5 1873 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 CDHR2Q9BYE9 1310 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 MRC1P22897 1456 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 RNF40O75150 1001 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 ZNF157P51786 506 aaPredicted RBP10.48□□□□□ -0.73
CASP4-201ENST00000393150 FMR1Q06787 632 aaKnown RBP eCLIP10.48□□□□□ -0.73
CASP4-201ENST00000393150 RGMBQ6NW40 437 aa10.48□□□□□ -0.73
CASP4-201ENST00000393150 CTU1Q7Z7A3 348 aaKnown RBP10.48□□□□□ -0.73
CASP4-201ENST00000393150 GLIS2Q9BZE0 524 aaPredicted RBP10.48□□□□□ -0.73
CASP4-201ENST00000393150 TCERG1O14776 1098 aaKnown RBP10.47□□□□□ -0.73
CASP4-201ENST00000393150 PPEF1O14829 653 aaPredicted RBP10.47□□□□□ -0.73
CASP4-201ENST00000393150 U2SURPO15042 1029 aaKnown RBP10.47□□□□□ -0.73
CASP4-201ENST00000393150 TRPA1O75762 1119 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 FDX1P10109 184 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 BCAMP50895 628 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 KIF6Q6ZMV9 814 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
CASP4-201ENST00000393150 TRPM7Q96QT4 1865 aa10.46□□□□□ -0.73
CASP4-201ENST00000393150 COL11A2P13942 1736 aaPredicted RBP10.46□□□□□ -0.73
CASP4-201ENST00000393150 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
CASP4-201ENST00000393150 FLIIQ13045 1269 aa10.46□□□□□ -0.73
CASP4-201ENST00000393150 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
CASP4-201ENST00000393150 DCPSQ96C86 337 aaKnown RBP10.46□□□□□ -0.73
CASP4-201ENST00000393150 NLRP3Q96P20 1036 aa10.46□□□□□ -0.73
CASP4-201ENST00000393150 CRAMP1Q96RY5 1269 aa10.46□□□□□ -0.73
CASP4-201ENST00000393150 ADAMTSL1Q8N6G6 1762 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 GMPSP49915 693 aaPredicted RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 MCM6Q14566 821 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 AOC3Q16853 763 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms