RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 HMGN5P82970 282 aaKnown RBP21.77■■□□□ 1.07
TRAF3-203ENST00000392745 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.07
TRAF3-203ENST00000392745 SNRKQ9NRH2 765 aa21.77■■□□□ 1.07
TRAF3-203ENST00000392745 RIPOR2Q9Y4F9 1068 aa21.77■■□□□ 1.07
TRAF3-203ENST00000392745 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
TRAF3-203ENST00000392745 GIMAP6Q6P9H5 292 aa21.76■■□□□ 1.07
TRAF3-203ENST00000392745 RUFY3Q7L099 469 aa21.76■■□□□ 1.07
TRAF3-203ENST00000392745 AFF2P51816 1311 aa21.76■■□□□ 1.07
TRAF3-203ENST00000392745 AP5Z1O43299 807 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 GTF2F1P35269 517 aaKnown RBP eCLIP21.75■■□□□ 1.07
TRAF3-203ENST00000392745 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
TRAF3-203ENST00000392745 SPTLC3Q9NUV7 552 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 ANKRD18BA2A2Z9 1011 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 LETM1O95202 739 aaPredicted RBP21.75■■□□□ 1.07
TRAF3-203ENST00000392745 LDHAL6AQ6ZMR3 332 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 BTAF1O14981 1849 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 CCDC171Q6TFL3 1326 aa21.75■■□□□ 1.07
TRAF3-203ENST00000392745 F13A1P00488 732 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 CPA1P15085 419 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 FUCA2Q9BTY2 467 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 ADORA1P30542 326 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 ZNF589Q86UQ0 364 aaPredicted RBP21.74■■□□□ 1.07
TRAF3-203ENST00000392745 UTP14AQ9BVJ6 771 aaKnown RBP21.74■■□□□ 1.07
TRAF3-203ENST00000392745 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.07
TRAF3-203ENST00000392745 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
TRAF3-203ENST00000392745 NECTIN1Q15223 517 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 MAP4K1Q92918 833 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 MED23Q9ULK4 1368 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 LARGE1O95461 756 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
TRAF3-203ENST00000392745 XAGE2Q96GT9 111 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 LIMCH1Q9UPQ0 1083 aa21.73■■□□□ 1.07
TRAF3-203ENST00000392745 SMC3Q9UQE7 1217 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 AKAP2Q9Y2D5 859 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 GOLIM4O00461 696 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 PARP10Q53GL7 1025 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 KBTBD3Q8NAB2 608 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 PAG1Q9NWQ8 432 aa21.72■■□□□ 1.07
TRAF3-203ENST00000392745 KCNF1Q9H3M0 494 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 KIF3AQ9Y496 699 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.71■■□□□ 1.07
TRAF3-203ENST00000392745 RBM8AQ9Y5S9 174 aaKnown RBP21.71■■□□□ 1.07
TRAF3-203ENST00000392745 NTSR2O95665 410 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 IFIT1P09914 478 aaKnown RBP21.71■■□□□ 1.07
TRAF3-203ENST00000392745 DNM1Q05193 864 aaKnown RBP21.71■■□□□ 1.07
TRAF3-203ENST00000392745 METTL24Q5JXM2 366 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 KCNB2Q92953 911 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 SEC62Q99442 399 aaKnown RBP21.71■■□□□ 1.07
TRAF3-203ENST00000392745 CNNM1Q9NRU3 951 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 PYCARDQ9ULZ3 195 aa21.71■■□□□ 1.07
TRAF3-203ENST00000392745 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
TRAF3-203ENST00000392745 AK7Q96M32 723 aa21.7■■□□□ 1.06
TRAF3-203ENST00000392745 NHSQ6T4R5 1651 aa21.7■■□□□ 1.06
TRAF3-203ENST00000392745 ADCK5Q3MIX3 580 aa21.7■■□□□ 1.06
TRAF3-203ENST00000392745 SLFNL1Q499Z3 407 aa21.7■■□□□ 1.06
TRAF3-203ENST00000392745 CNTNAP4Q9C0A0 1308 aa21.7■■□□□ 1.06
TRAF3-203ENST00000392745 DDX60Q8IY21 1712 aaKnown RBP21.7■■□□□ 1.06
TRAF3-203ENST00000392745 VGLL2Q8N8G2 317 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 BCORQ6W2J9 1755 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 TAF5LO75529 589 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 CASTP20810 708 aaKnown RBP21.69■■□□□ 1.06
TRAF3-203ENST00000392745 CCDC83Q8IWF9 413 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 SPC24Q8NBT2 197 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 KIAA1524Q8TCG1 905 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 RFX7Q2KHR2 1363 aa21.69■■□□□ 1.06
TRAF3-203ENST00000392745 SBF2Q86WG5 1849 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 GJB2P29033 226 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 CBX1P83916 185 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 CCDC158Q5M9N0 1113 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 CREB3L3Q68CJ9 461 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 CLEC4GQ6UXB4 293 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 ZHX1Q9UKY1 873 aaPredicted RBP21.68■■□□□ 1.06
TRAF3-203ENST00000392745 ZSCAN20P17040 1043 aaPredicted RBP21.68■■□□□ 1.06
TRAF3-203ENST00000392745 ATP2B3Q16720 1220 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 GORABQ5T7V8 394 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 CCDC129Q6ZRS4 1044 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.68■■□□□ 1.06
TRAF3-203ENST00000392745 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 TRPC5Q9UL62 973 aaPredicted RBP21.68■■□□□ 1.06
TRAF3-203ENST00000392745 ATP6V1DQ9Y5K8 247 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 ATRNO75882 1429 aa21.68■■□□□ 1.06
TRAF3-203ENST00000392745 PPP4R3BQ5MIZ7 849 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 SEPT12Q8IYM1 358 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 MTMR6Q9Y217 621 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 EP400Q96L91 3159 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 SCARF1Q14162 830 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 TTC39AQ5SRH9 613 aa21.67■■□□□ 1.06
TRAF3-203ENST00000392745 PDE8BO95263 885 aa21.66■■□□□ 1.06
TRAF3-203ENST00000392745 KCNJ4P48050 445 aa21.66■■□□□ 1.06
TRAF3-203ENST00000392745 MCMDC2Q4G0Z9 681 aa21.66■■□□□ 1.06
TRAF3-203ENST00000392745 SLC27A2O14975 620 aa21.66■■□□□ 1.06
TRAF3-203ENST00000392745 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.06
TRAF3-203ENST00000392745 DMTNQ08495 405 aa21.66■■□□□ 1.06
TRAF3-203ENST00000392745 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
TRAF3-203ENST00000392745 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
TRAF3-203ENST00000392745 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms