RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 GALNT12Q8IXK2 581 aa10.67□□□□□ -0.7
SNORA40.4-201ENST00000390971 KRBA1A5PL33 1030 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 NFKBIEO00221 500 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 PDE2AO00408 941 aaPredicted RBP10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 EIF1AYO14602 144 aaKnown RBP10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 POLR3DP05423 398 aaPredicted RBP10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 PTPRAP18433 802 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 CDC27P30260 824 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 TMEM102Q8N9M5 508 aaPredicted RBP10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 LACRTQ9GZZ8 138 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
SNORA40.4-201ENST00000390971 FAM229AH3BQW9 127 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 ACPPP15309 386 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 ASB16Q96NS5 453 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 CSRNP1Q96S65 589 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 ADAM19Q9H013 955 aa10.65□□□□□ -0.7
SNORA40.4-201ENST00000390971 TREHO43280 583 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 APBA3O96018 575 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 ELNP15502 786 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 DSC3Q14574 896 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 FBXO11Q86XK2 927 aa10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 SRA1Q9HD15 236 aaKnown RBP10.64□□□□□ -0.71
SNORA40.4-201ENST00000390971 TRPA1O75762 1119 aa10.63□□□□□ -0.71
SNORA40.4-201ENST00000390971 PEAR1Q5VY43 1037 aaPredicted RBP10.63□□□□□ -0.71
SNORA40.4-201ENST00000390971 MAP4K3Q8IVH8 894 aa10.63□□□□□ -0.71
SNORA40.4-201ENST00000390971 NACC1Q96RE7 527 aa10.63□□□□□ -0.71
SNORA40.4-201ENST00000390971 LATS2Q9NRM7 1088 aa10.63□□□□□ -0.71
SNORA40.4-201ENST00000390971 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
SNORA40.4-201ENST00000390971 A0A1W2PP55 124 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 CABP4P57796 275 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 KIAA0319Q5VV43 1072 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 CCDC74AQ96AQ1 378 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 HHIPQ96QV1 700 aa10.61□□□□□ -0.71
SNORA40.4-201ENST00000390971 GRIK4Q16099 956 aa10.6□□□□□ -0.71
SNORA40.4-201ENST00000390971 PLA2G4EQ3MJ16 856 aa10.6□□□□□ -0.71
SNORA40.4-201ENST00000390971 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
SNORA40.4-201ENST00000390971 BHLHE41Q9C0J9 482 aaPredicted RBP10.6□□□□□ -0.71
SNORA40.4-201ENST00000390971 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
SNORA40.4-201ENST00000390971 LINC01387J3KSC0 135 aa10.59□□□□□ -0.71
SNORA40.4-201ENST00000390971 DEAF1O75398 565 aaPredicted RBP10.59□□□□□ -0.71
SNORA40.4-201ENST00000390971 BSNDQ8WZ55 320 aa10.59□□□□□ -0.71
SNORA40.4-201ENST00000390971 C1QTNF9BB2RNN3 333 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 C9orf172C9J069 976 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 SETDB1Q15047 1291 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 ADAMTSL4Q6UY14 1074 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 CD163Q86VB7 1156 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 LIN7BQ9HAP6 207 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 NPHS2Q9NP85 383 aa10.58□□□□□ -0.72
SNORA40.4-201ENST00000390971 ZBTB7CA1YPR0 619 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 IGHA1P01876 353 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 EPHA1P21709 976 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 CDC25BP30305 580 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 IGF2-ASQ6U949 168 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 CCNJLQ8IV13 435 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 ASAP3Q8TDY4 903 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 LENG1Q96BZ8 264 aaPredicted RBP10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 EHD4Q9H223 541 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 SOX13Q9UN79 622 aa10.57□□□□□ -0.72
SNORA40.4-201ENST00000390971 PNMA6FA0A0J9YX94 578 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 H3BRJ5 948 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 DLL1O00548 723 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 SELPP16109 830 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 FMR1Q06787 632 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 WNT8BQ93098 351 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
SNORA40.4-201ENST00000390971 FSCN2O14926 492 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 MAPK8P45983 427 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 GPAT2Q6NUI2 795 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 TXNDC11Q6PKC3 985 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 KLHL23Q8NBE8 558 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 EPS8L3Q8TE67 593 aaKnown RBP10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 TCF12Q99081 682 aa10.55□□□□□ -0.72
SNORA40.4-201ENST00000390971 ITGB2P05107 769 aa10.54□□□□□ -0.72
SNORA40.4-201ENST00000390971 CHRNA4P43681 627 aa10.54□□□□□ -0.72
SNORA40.4-201ENST00000390971 PIP4K2BP78356 416 aa10.54□□□□□ -0.72
SNORA40.4-201ENST00000390971 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
SNORA40.4-201ENST00000390971 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
SNORA40.4-201ENST00000390971 A0A096LPE4 126 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 A0A1W2PPZ6 126 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 MSTNO14793 375 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 ARL4DP49703 201 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 ALG1LQ6GMV1 187 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 VN1R5Q7Z5H4 357 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 SEC31BQ9NQW1 1179 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 USP21Q9UK80 565 aa10.53□□□□□ -0.72
SNORA40.4-201ENST00000390971 ANKRD33BA6NCL7 494 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 METTL12A8MUP2 240 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 IKBKEQ14164 716 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 COL19A1Q14993 1142 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms