RNA–Protein interactions for RNA: ENST00000390329.3

AP000346.1-201, humanhuman

TSL 5 BASIC

Gene AP000346.1, Length 1,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.1-201ENST00000390329 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
AP000346.1-201ENST00000390329 DPF3Q92784 378 aa14.04□□□□□ -0.16
AP000346.1-201ENST00000390329 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
AP000346.1-201ENST00000390329 MYOZ2Q9NPC6 264 aa14.04□□□□□ -0.16
AP000346.1-201ENST00000390329 IGF2BP3O00425 579 aaKnown RBP eCLIP14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 NBPF9Q3BBW0 867 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 CELF1Q92879 486 aaKnown RBP14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 FZD1Q9UP38 647 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 LAMB2P55268 1798 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 SCN9AQ15858 1988 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 LAMA3Q16787 3333 aa14.03□□□□□ -0.16
AP000346.1-201ENST00000390329 PITPNM2Q9BZ72 1349 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 SOX1O00570 391 aaPredicted RBP14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 EIF2S2P20042 333 aaKnown RBP14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 RSBN1LQ6PCB5 846 aaPredicted RBP14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 TBC1D16Q8TBP0 767 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 GMLQ99445 158 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 PRO3102Q9H379 93 aa14.02□□□□□ -0.17
AP000346.1-201ENST00000390329 ERBB4Q15303 1308 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 HOXB7P09629 217 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 USP17L8P0C7I0 530 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 CRHR2Q13324 411 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 LDLRAD1Q5T700 205 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 EYA3Q99504 573 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 CHPF2Q9P2E5 772 aa14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
AP000346.1-201ENST00000390329 MANSC4A6NHS7 340 aaPredicted RBP14□□□□□ -0.17
AP000346.1-201ENST00000390329 G3V3G9 751 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 NF2P35240 595 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 INHBEP58166 350 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 ARMC9Q7Z3E5 817 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 NLRP10Q86W26 655 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 PTCH2Q9Y6C5 1203 aa14□□□□□ -0.17
AP000346.1-201ENST00000390329 SP3Q02447 781 aa13.99□□□□□ -0.17
AP000346.1-201ENST00000390329 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
AP000346.1-201ENST00000390329 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
AP000346.1-201ENST00000390329 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
AP000346.1-201ENST00000390329 ANGEL1Q9UNK9 670 aaKnown RBP13.99□□□□□ -0.17
AP000346.1-201ENST00000390329 ZNF609O15014 1411 aa13.98□□□□□ -0.17
AP000346.1-201ENST00000390329 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
AP000346.1-201ENST00000390329 CLMNQ96JQ2 1002 aa13.98□□□□□ -0.17
AP000346.1-201ENST00000390329 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 SH3TC2Q8TF17 1288 aa13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 LRRC37AA6NMS7 1700 aa13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 COL4A1P02462 1669 aa13.97□□□□□ -0.17
AP000346.1-201ENST00000390329 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
AP000346.1-201ENST00000390329 GOLGA2Q08379 1002 aa13.96□□□□□ -0.17
AP000346.1-201ENST00000390329 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
AP000346.1-201ENST00000390329 PTPN18Q99952 460 aa13.96□□□□□ -0.17
AP000346.1-201ENST00000390329 MXD3Q9BW11 206 aa13.96□□□□□ -0.17
AP000346.1-201ENST00000390329 DDX60Q8IY21 1712 aaKnown RBP13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 WNT10BO00744 389 aa13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 UFL1O94874 794 aa13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 WNK4Q96J92 1243 aa13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 MYH16Q9H6N6 1097 aa13.95□□□□□ -0.18
AP000346.1-201ENST00000390329 E9PSI1 815 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 VAMP4O75379 141 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 SASH1O94885 1247 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 RPS8P62241 208 aaKnown RBP13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 VCANP13611 3396 aa13.94□□□□□ -0.18
AP000346.1-201ENST00000390329 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 ZBTB48P10074 688 aaPredicted RBP13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 GJA5P36382 358 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 Q7L0L9 218 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 G2E3Q7L622 706 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 ANKIB1Q9P2G1 1089 aa13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 SPTBN5Q9NRC6 3674 aaKnown RBP13.93□□□□□ -0.18
AP000346.1-201ENST00000390329 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 MTFR1Q15390 333 aa13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 PODXL2Q9NZ53 605 aa13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 GGA1Q9UJY5 639 aa13.92□□□□□ -0.18
AP000346.1-201ENST00000390329 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
AP000346.1-201ENST00000390329 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms