RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CASZ1Q86V15 1759 aa21.69■■□□□ 1.06
ACTN4-202ENST00000390009 WDR33Q9C0J8 1336 aaKnown RBP21.69■■□□□ 1.06
ACTN4-202ENST00000390009 HSPD1P10809 573 aaKnown RBP21.69■■□□□ 1.06
ACTN4-202ENST00000390009 FAM182BQ5T319 152 aa21.69■■□□□ 1.06
ACTN4-202ENST00000390009 MEX3CQ5U5Q3 659 aaKnown RBP21.69■■□□□ 1.06
ACTN4-202ENST00000390009 HELBQ8NG08 1087 aaPredicted RBP21.69■■□□□ 1.06
ACTN4-202ENST00000390009 LPIN2Q92539 896 aa21.69■■□□□ 1.06
ACTN4-202ENST00000390009 FGFR2P21802 821 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 CHAMP1Q96JM3 812 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 DDX49Q9Y6V7 483 aaKnown RBP21.68■■□□□ 1.06
ACTN4-202ENST00000390009 SBF2Q86WG5 1849 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 ST3GAL1Q11201 340 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 TOB2Q14106 344 aaPredicted RBP21.68■■□□□ 1.06
ACTN4-202ENST00000390009 KLHL40Q2TBA0 621 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 CERKQ8TCT0 537 aa21.68■■□□□ 1.06
ACTN4-202ENST00000390009 WASHC4Q2M389 1173 aa21.67■■□□□ 1.06
ACTN4-202ENST00000390009 CCDC102BQ68D86 513 aa21.67■■□□□ 1.06
ACTN4-202ENST00000390009 GJD4Q96KN9 370 aaPredicted RBP21.67■■□□□ 1.06
ACTN4-202ENST00000390009 PHKA1P46020 1223 aa21.67■■□□□ 1.06
ACTN4-202ENST00000390009 ARID4AP29374 1257 aaPredicted RBP21.66■■□□□ 1.06
ACTN4-202ENST00000390009 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
ACTN4-202ENST00000390009 NECAB1Q8N987 351 aa21.66■■□□□ 1.06
ACTN4-202ENST00000390009 APPBP2Q92624 585 aa21.66■■□□□ 1.06
ACTN4-202ENST00000390009 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
ACTN4-202ENST00000390009 TCHHQ07283 1943 aa21.66■■□□□ 1.06
ACTN4-202ENST00000390009 LY75O60449 1722 aa21.66■■□□□ 1.06
ACTN4-202ENST00000390009 PRPF40AO75400 957 aaKnown RBP21.65■■□□□ 1.06
ACTN4-202ENST00000390009 IGHMBP2P38935 993 aaKnown RBP21.65■■□□□ 1.06
ACTN4-202ENST00000390009 STOX1Q6ZVD7 989 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 FSD2A1L4K1 749 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 RGL2O15211 777 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 UQCRFS1P1P0C7P4 283 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 SLC5A1P13866 664 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 SYT1P21579 422 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 GJB2P29033 226 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 TTF1Q15361 905 aaPredicted RBP21.65■■□□□ 1.06
ACTN4-202ENST00000390009 SMIM5Q71RC9 77 aa21.65■■□□□ 1.06
ACTN4-202ENST00000390009 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.65■■□□□ 1.061e-6■■□□□ 12.9
ACTN4-202ENST00000390009 GOLGA6L3A6NEY3 463 aa21.64■■□□□ 1.06
ACTN4-202ENST00000390009 STX6O43752 255 aa21.64■■□□□ 1.06
ACTN4-202ENST00000390009 RPS6KA4O75676 772 aa21.64■■□□□ 1.06
ACTN4-202ENST00000390009 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.06
ACTN4-202ENST00000390009 AFF2P51816 1311 aa21.64■■□□□ 1.05
ACTN4-202ENST00000390009 HSPA1LP34931 641 aa21.64■■□□□ 1.05
ACTN4-202ENST00000390009 ERFEQ4G0M1 354 aa21.64■■□□□ 1.05
ACTN4-202ENST00000390009 L1TD1Q5T7N2 865 aaKnown RBP21.64■■□□□ 1.05
ACTN4-202ENST00000390009 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.05
ACTN4-202ENST00000390009 COL4A1P02462 1669 aa21.63■■□□□ 1.05
ACTN4-202ENST00000390009 HMGB1P09429 215 aaKnown RBP21.63■■□□□ 1.05
ACTN4-202ENST00000390009 ZSCAN25Q6NSZ9 544 aa21.63■■□□□ 1.05
ACTN4-202ENST00000390009 PUS7LQ9H0K6 701 aaKnown RBP21.63■■□□□ 1.05
ACTN4-202ENST00000390009 ZSCAN22P10073 491 aaPredicted RBP21.62■■□□□ 1.05
ACTN4-202ENST00000390009 TAF1P21675 1872 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 TBC1D9BQ66K14 1250 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 BICDL1Q6ZP65 573 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 NARFQ9UHQ1 456 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 A0A0G2JLW4 131 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 SNAP23O00161 211 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 GNPATO15228 680 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 ADD2P35612 726 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 Q6ZUG5 572 aa21.62■■□□□ 1.05
ACTN4-202ENST00000390009 CDC5LQ99459 802 aaKnown RBP21.62■■□□□ 1.05
ACTN4-202ENST00000390009 PIH1D3Q9NQM4 214 aaKnown RBP21.62■■□□□ 1.05
ACTN4-202ENST00000390009 FOXP2O15409 715 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 A0A1B0GUL6 1792 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 DOCK2Q92608 1830 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 DTNBO60941 627 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 SLC9C2Q5TAH2 1124 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 TTLL5Q6EMB2 1281 aa21.61■■□□□ 1.05
ACTN4-202ENST00000390009 E7EWF7 191 aa21.6■■□□□ 1.05
ACTN4-202ENST00000390009 GPAA1O43292 621 aa21.6■■□□□ 1.05
ACTN4-202ENST00000390009 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
ACTN4-202ENST00000390009 SF3B3Q15393 1217 aaKnown RBP21.6■■□□□ 1.05
ACTN4-202ENST00000390009 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
ACTN4-202ENST00000390009 DHX32Q7L7V1 743 aaKnown RBP21.6■■□□□ 1.05
ACTN4-202ENST00000390009 SRP68Q9UHB9 627 aaKnown RBP21.6■■□□□ 1.05
ACTN4-202ENST00000390009 CTNNA3Q9UI47 895 aa21.6■■□□□ 1.05
ACTN4-202ENST00000390009 ATRNO75882 1429 aa21.6■■□□□ 1.05
ACTN4-202ENST00000390009 CHRNDQ07001 517 aa21.59■■□□□ 1.05
ACTN4-202ENST00000390009 FOXD4L6Q3SYB3 417 aaPredicted RBP21.59■■□□□ 1.05
ACTN4-202ENST00000390009 FOXD4L3Q6VB84 417 aaPredicted RBP21.59■■□□□ 1.05
ACTN4-202ENST00000390009 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
ACTN4-202ENST00000390009 NCLP19338 710 aaKnown RBP21.59■■□□□ 1.05
ACTN4-202ENST00000390009 STK3Q13188 491 aa21.59■■□□□ 1.05
ACTN4-202ENST00000390009 SPATA5Q8NB90 893 aa21.59■■□□□ 1.05
ACTN4-202ENST00000390009 GPT2Q8TD30 523 aa21.59■■□□□ 1.05
ACTN4-202ENST00000390009 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
ACTN4-202ENST00000390009 ZPR1O75312 459 aa21.58■■□□□ 1.05
ACTN4-202ENST00000390009 F13A1P00488 732 aa21.58■■□□□ 1.05
ACTN4-202ENST00000390009 GTF2E1P29083 439 aaPredicted RBP21.58■■□□□ 1.05
ACTN4-202ENST00000390009 RASGRF1Q13972 1273 aa21.58■■□□□ 1.05
ACTN4-202ENST00000390009 UBE3CQ15386 1083 aa21.58■■□□□ 1.05
ACTN4-202ENST00000390009 LRRC2Q9BYS8 371 aa21.58■■□□□ 1.05
ACTN4-202ENST00000390009 TRPC5Q9UL62 973 aaPredicted RBP21.58■■□□□ 1.05
ACTN4-202ENST00000390009 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.05
ACTN4-202ENST00000390009 BRF1Q92994 677 aa21.58■■□□□ 1.04
ACTN4-202ENST00000390009 C4AP0C0L4 1744 aa21.58■■□□□ 1.04
ACTN4-202ENST00000390009 C4BP0C0L5 1744 aa21.58■■□□□ 1.04
ACTN4-202ENST00000390009 FGAP02671 866 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms