RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
CAPRIN1-202ENST00000389645 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
CAPRIN1-202ENST00000389645 CCDC87Q9NVE4 849 aa14.3□□□□□ -0.12
CAPRIN1-202ENST00000389645 TNNI3KQ59H18 835 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 ATG9AQ7Z3C6 839 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 BRF1Q92994 677 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 FPGT-TNNI3KV9GXZ4 949 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 ADCY5O95622 1261 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 IL6STP40189 918 aaPredicted RBP14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 C17orf53Q8N3J3 647 aaPredicted RBP14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 ZSWIM6Q9HCJ5 1215 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 JAK2O60674 1132 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 EIF5P55010 431 aaKnown RBP14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 NECTIN1Q15223 517 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 SPATA32Q96LK8 384 aa14.29□□□□□ -0.12
CAPRIN1-202ENST00000389645 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 USP42Q9H9J4 1324 aaKnown RBP14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 IGSF3O75054 1194 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 PDCP20941 246 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 TRIM28Q13263 835 aaKnown RBP14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 NEK1Q96PY6 1258 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 ZKSCAN5Q9Y2L8 839 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
CAPRIN1-202ENST00000389645 ZBTB22O15209 634 aa14.27□□□□□ -0.12
CAPRIN1-202ENST00000389645 HAND2P61296 217 aa14.27□□□□□ -0.12
CAPRIN1-202ENST00000389645 Q6ZUG5 572 aa14.27□□□□□ -0.12
CAPRIN1-202ENST00000389645 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.12
CAPRIN1-202ENST00000389645 AFF2P51816 1311 aa14.27□□□□□ -0.12
CAPRIN1-202ENST00000389645 TPM2P07951 284 aa14.27□□□□□ -0.13
CAPRIN1-202ENST00000389645 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.27□□□□□ -0.13
CAPRIN1-202ENST00000389645 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
CAPRIN1-202ENST00000389645 GREM2Q9H772 168 aa14.27□□□□□ -0.13
CAPRIN1-202ENST00000389645 NOL7Q9UMY1 257 aaKnown RBP14.27□□□□□ -0.13
CAPRIN1-202ENST00000389645 IRS4O14654 1257 aaPredicted RBP14.26□□□□□ -0.13
CAPRIN1-202ENST00000389645 LINC00116Q8NCU8 138 aa14.26□□□□□ -0.13
CAPRIN1-202ENST00000389645 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
CAPRIN1-202ENST00000389645 TNMDQ9H2S6 317 aa14.26□□□□□ -0.13
CAPRIN1-202ENST00000389645 SPATA31A6Q5VVP1 1343 aa14.26□□□□□ -0.13
CAPRIN1-202ENST00000389645 EYA2O00167 538 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 IFIT1P09914 478 aaKnown RBP14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 SUSD4Q5VX71 490 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 NWD2Q9ULI1 1742 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 GJD4Q96KN9 370 aaPredicted RBP14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.132e-10■■■□□ 14.9
CAPRIN1-202ENST00000389645 COL15A1P39059 1388 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 TTC6Q86TZ1 520 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 TJP1Q07157 1748 aa14.25□□□□□ -0.13
CAPRIN1-202ENST00000389645 UQCRHLA0A096LP55 91 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 TAF5LO75529 589 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 UQCRHP07919 91 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 APPP05067 770 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 LIG1P18858 919 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 ITGA6P23229 1130 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 MCMDC2Q4G0Z9 681 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 NCOA5Q9HCD5 579 aaKnown RBP14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
CAPRIN1-202ENST00000389645 ERVV-1B6SEH8 477 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 OFD1O75665 1012 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 APOBRQ0VD83 1088 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 SMARCC1Q92922 1105 aaPredicted RBP14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 TCHHQ07283 1943 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 A0A1B0GUL7 405 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 CAMTA2O94983 1202 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 LETM1O95202 739 aaPredicted RBP14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 CSF1RP07333 972 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 ADORA1P30542 326 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 LDHAL6AQ6ZMR3 332 aa14.23□□□□□ -0.13
CAPRIN1-202ENST00000389645 CYP21A2P08686 494 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 KRT32Q14532 448 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 STK11IPQ8N1F8 1099 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 HELBQ8NG08 1087 aaPredicted RBP14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 CTSWP56202 376 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 TTC39AQ5SRH9 613 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 SASS6Q6UVJ0 657 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 PDLIM2Q96JY6 352 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 TRIM5Q9C035 493 aa14.22□□□□□ -0.13
CAPRIN1-202ENST00000389645 ATP5JP18859 108 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms