RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 SH3TC1Q8TE82 1336 aa14.95□□□□□ -0.02
PTPRN2-203ENST00000389418 ZBTB43O43298 467 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 CETN2P41208 172 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 PLBD2Q8NHP8 589 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 ERLIN1O75477 346 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 CALM1P0DP23 149 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 CALM2P0DP24 149 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 CALM3P0DP25 149 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 TTLL7Q6ZT98 887 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 SFPQP23246 707 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■■□ 20.2
PTPRN2-203ENST00000389418 UBA7P41226 1012 aa14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
PTPRN2-203ENST00000389418 UFL1O94874 794 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 SAMM50Q9Y512 469 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 JDP2Q8WYK2 163 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 SNX21Q969T3 373 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 POLD1P28340 1107 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 ARHGAP29Q52LW3 1261 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 CCDC191Q8NCU4 936 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 KIAA0232Q92628 1395 aa14.93□□□□□ -0.02
PTPRN2-203ENST00000389418 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 CETN1Q12798 172 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 SUCLG2Q96I99 432 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 ASAP1Q9ULH1 1129 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 UBE2HP62256 183 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 ZNF408Q9H9D4 720 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 ZSCAN12O43309 604 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 CHMLP26374 656 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 TAF4BQ92750 862 aa14.92□□□□□ -0.02
PTPRN2-203ENST00000389418 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 Q6ZUG5 572 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 PLXNC1O60486 1568 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 NEMFO60524 1076 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 SPA17Q15506 151 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 IFIT1BQ5T764 474 aaKnown RBP14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 CCDC102BQ68D86 513 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 ERMNQ8TAM6 284 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 CPLX3Q8WVH0 158 aa14.91□□□□□ -0.02
PTPRN2-203ENST00000389418 ZNF165P49910 485 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 DNA2P51530 1060 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 ZYXQ15942 572 aaKnown RBP14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 KIAA1328Q86T90 577 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 CERS3Q8IU89 383 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 METTL22Q9BUU2 404 aaPredicted RBP14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 ZMYM4Q5VZL5 1548 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 MBD4O95243 580 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 RTN1Q16799 776 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 MAGEB6P1A0A0J9YX57 407 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 PLS1Q14651 629 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 HEATR3Q7Z4Q2 680 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 FAM114A1Q8IWE2 563 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 STK32BQ9NY57 414 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 EIF4A1P60842 406 aaKnown RBP14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 APOBRQ0VD83 1088 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 KCNG4Q8TDN1 519 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
PTPRN2-203ENST00000389418 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 GIMAP6Q6P9H5 292 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 UQCRHLA0A096LP55 91 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 UQCRHP07919 91 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 CALML3P27482 149 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 CACNA2D4Q7Z3S7 1137 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 PRC1O43663 620 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 TRIM37O94972 964 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 LDHBP07195 334 aaKnown RBP14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 SP4Q02446 784 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 RTL9Q8NET4 1388 aa14.89□□□□□ -0.03
PTPRN2-203ENST00000389418 EYA2O00167 538 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 CCDC150Q8NCX0 1101 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 USP26Q9BXU7 913 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 GTPBP4Q9BZE4 634 aaKnown RBP14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 RMND1Q9NWS8 449 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 DENND2AQ9ULE3 1009 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 B4DLN1 442 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 MRPL12P52815 198 aaKnown RBP14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 STX1AQ16623 288 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 AK2P54819 239 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 RBM17Q96I25 401 aaKnown RBP14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 QTRT2Q9H974 415 aaKnown RBP14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 EFCAB6Q5THR3 1501 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 TCP10Q12799 353 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 CLIP2Q9UDT6 1046 aa14.88□□□□□ -0.03
PTPRN2-203ENST00000389418 KDM2BQ8NHM5 1336 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms