RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 NFATC2IPQ8NCF5 419 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 SRRTQ9BXP5 876 aaKnown RBP6.46□□□□□ -1.38
GEN1-202ENST00000381254 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 AKAP2Q9Y2D5 859 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 ALKQ9UM73 1620 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 MAST3O60307 1309 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 TULP4Q9NRJ4 1543 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 MANSC4A6NHS7 340 aaPredicted RBP6.46□□□□□ -1.38
GEN1-202ENST00000381254 MARCH6O60337 910 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 ERLIN2O94905 339 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 INHBEP58166 350 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 MKRN3Q13064 507 aaKnown RBP6.46□□□□□ -1.38
GEN1-202ENST00000381254 GPC2Q8N158 579 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 GRPEL1Q9HAV7 217 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 MYOM2P54296 1465 aa6.46□□□□□ -1.38
GEN1-202ENST00000381254 AOX1Q06278 1338 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 CPSF1Q10570 1443 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 BBOX1O75936 387 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 PRKAR2BP31323 418 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 MAP1SQ66K74 1059 aaPredicted RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 EP400NLQ6ZTU2 488 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 DDX12PQ92771 950 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 SLIT2O94813 1529 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 LPXNO60711 386 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 OSBPP22059 807 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 KANK3Q6NY19 840 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 HOMER1Q86YM7 354 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 FEZ1Q99689 392 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 BCL9LQ86UU0 1499 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 PTPRUQ92729 1446 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 GOLGA6L7A0A1B0GV03 622 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 CCDC57Q2TAC2 916 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 RGMBQ6NW40 437 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 CCDC112Q8NEF3 446 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 INTS4Q96HW7 963 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 GCC2Q8IWJ2 1684 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 RPS12P25398 132 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 CCDC158Q5M9N0 1113 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 LRRC27Q9C0I9 530 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 EDC4Q6P2E9 1401 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 RNF123Q5XPI4 1314 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 COL14A1Q05707 1796 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 TUBB2AQ13885 445 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 ZNF827Q17R98 1081 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 PRPF38BQ5VTL8 546 aaKnown RBP6.45□□□□□ -1.38
GEN1-202ENST00000381254 BLOC1S2Q6QNY1 142 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 TUBB2BQ9BVA1 445 aa6.45□□□□□ -1.38
GEN1-202ENST00000381254 ALDH1L1O75891 902 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 FGFR1OPO95684 399 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 NEK4P51957 841 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 PRPF40BQ6NWY9 871 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 ANGEL1Q9UNK9 670 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 CCDC171Q6TFL3 1326 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 TMPOP42166 694 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 SPAG1Q07617 926 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 BRDTQ58F21 947 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 GAS2L1Q99501 681 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 ZNRF3Q9ULT6 936 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 MYO3BQ8WXR4 1341 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 TNS2Q63HR2 1409 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 DDNO94850 711 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 TAF1CQ15572 869 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 DNAJC10Q8IXB1 793 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 ANO10Q9NW15 660 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 GTPBP6O43824 516 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 PPP1R2P41236 205 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 MAP9Q49MG5 647 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 FILIP1Q7Z7B0 1213 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 FSD1Q9BTV5 496 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 ZSCAN16Q9H4T2 348 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 SURF6O75683 361 aaKnown RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 ZFYP08048 801 aaPredicted RBP6.44□□□□□ -1.38
GEN1-202ENST00000381254 EHBP1Q8NDI1 1231 aa6.44□□□□□ -1.38
GEN1-202ENST00000381254 IKQ13123 557 aaPredicted RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 STK38Q15208 465 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 CNKSR2Q8WXI2 1034 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 DNAI2Q9GZS0 605 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 ZRSR2Q15696 482 aaKnown RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 CCDC183Q5T5S1 534 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 RNF41Q9H4P4 317 aaPredicted RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 CNGA1P29973 690 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 CCNA1P78396 465 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 IRX3P78415 501 aaPredicted RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 KIF4BQ2VIQ3 1234 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 HDGFL1Q5TGJ6 251 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 AS3MTQ9HBK9 375 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 SRP68Q9UHB9 627 aaKnown RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 HCN4Q9Y3Q4 1203 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 COL16A1Q07092 1604 aaPredicted RBP6.43□□□□□ -1.38
GEN1-202ENST00000381254 RGPD1P0DJD0 1748 aa6.43□□□□□ -1.38
GEN1-202ENST00000381254 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms