RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RUNDC3BQ96NL0 473 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 MPHOSPH6Q99547 160 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 TBC1D2Q9BYX2 928 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 STK24Q9Y6E0 443 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 KIF5BP33176 963 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 MAP7Q14244 749 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 SEPT7Q16181 437 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 AP1ARQ63HQ0 302 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 RAI14Q9P0K7 980 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 PSDA5PKW4 1024 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 MSL1Q68DK7 614 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC57Q2TAC2 916 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 DUSP27Q5VZP5 1158 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 LUC7L2Q9Y383 392 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 STAMBPO95630 424 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 RBM10P98175 930 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 MPNDQ8N594 471 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 THOC1Q96FV9 657 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 SPATA32Q96LK8 384 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 SPTLC3Q9NUV7 552 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 ARHGEF28Q8N1W1 1705 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 NRXN1Q9ULB1 1477 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 NUCB1Q02818 461 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SPECC1Q5M775 1068 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 HDGFL1Q5TGJ6 251 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 STK32BQ9NY57 414 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SRRM3A6NNA2 597 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 HNRNPCL1O60812 293 aaKnown RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 PPM1FP49593 454 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 HSP90AA5PQ58FG0 334 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 FBF1Q8TES7 1133 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 LIMCH1Q9UPQ0 1083 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CTAGE9A4FU28 777 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ENO4A6NNW6 628 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 NEDD9Q14511 834 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 BRAPQ7Z569 592 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 FAM76AQ8TAV0 307 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 NUCKS1Q9H1E3 243 aaKnown RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 NEO1Q92859 1461 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SRGAP3O43295 1099 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 YEATS4O95619 227 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 KRT83P78385 493 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CFAP70Q5T0N1 1121 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 MMS22LQ6ZRQ5 1243 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 DENND4BO75064 1496 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF189O75820 626 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC121Q6ZUS5 278 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC110Q8TBZ0 833 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 RABGGTAQ92696 567 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SDF4Q9BRK5 362 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 RNF14Q9UBS8 474 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 DAAM1Q9Y4D1 1078 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CEBPAP49715 358 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SOGA3Q5TF21 947 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 LRCH2Q5VUJ6 765 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CABP1Q9NZU7 370 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 RGS12O14924 1447 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 NCOA3Q9Y6Q9 1424 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 TACC1O75410 805 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 CETN2P41208 172 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ST5P78524 1137 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SLF2Q8IX21 1173 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ZFYP08048 801 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 LMOD1P29536 600 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 WHAMMP3Q1A5X7 153 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF10Q6P3W6 841 aaKnown RBP5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF592Q92610 1267 aa5.55□□□□□ -1.52
PTPRD-203ENST00000381196 ZFYVE27Q5T4F4 411 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 CNOT10Q9H9A5 744 aaKnown RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 PHLDB2Q86SQ0 1253 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 FAM177A1Q8N128 213 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 STAG1Q8WVM7 1258 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 RAB3IPQ96QF0 476 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 FAM129AQ9BZQ8 928 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ADGRB2O60241 1585 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 A0A087WUV0 522 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 GNAI2P04899 355 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 LACTBP83111 547 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ITIH3Q06033 890 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 CLASRPQ8N2M8 674 aaKnown RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 MRGBPQ9NV56 204 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 KIAA0753Q2KHM9 967 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 PDZRN3Q9UPQ7 1066 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 FOXP2O15409 715 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 PPP2R5BQ15173 497 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 LMBR1Q8WVP7 490 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 TCHPQ9BT92 498 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 APAF1O14727 1248 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 HSF2BPO75031 334 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 PRKAR2BP31323 418 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 TNIP1Q15025 636 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC178Q5BJE1 867 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC181Q5TID7 509 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF365Q70YC5 407 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 TRIM22Q8IYM9 498 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 VCX3AQ9NNX9 186 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms