RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 ZMYM1Q5SVZ6 1142 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 WNK3Q9BYP7 1800 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
PDX1-201ENST00000381033 CCDC158Q5M9N0 1113 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 ZNF34Q8IZ26 560 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 PLCD3Q8N3E9 789 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 NEK1Q96PY6 1258 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 CDHR2Q9BYE9 1310 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
PDX1-201ENST00000381033 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
PDX1-201ENST00000381033 ATP2B3Q16720 1220 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 RNF113AO15541 343 aaKnown RBP20.44■□□□□ 0.86
PDX1-201ENST00000381033 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 TSGA10IPQ3SY00 556 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 MCAMP43121 646 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 Q6ZUG5 572 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 FAM173BQ6P4H8 233 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 SH2B1Q9NRF2 756 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 MTMR6Q9Y217 621 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 U3KPZ7 1027 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 ERVV-1B6SEH8 477 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 FOXP2O15409 715 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 PDE8AO60658 829 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 ZNF830Q96NB3 372 aaPredicted RBP20.42■□□□□ 0.86
PDX1-201ENST00000381033 PUS7LQ9H0K6 701 aaKnown RBP20.42■□□□□ 0.86
PDX1-201ENST00000381033 SYCE3A1L190 88 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 WASHC4Q2M389 1173 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 VGLL2Q8N8G2 317 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 F13A1P00488 732 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 RFX7Q2KHR2 1363 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 JAK2O60674 1132 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 HAND2P61296 217 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
PDX1-201ENST00000381033 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 PHKA1P46020 1223 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 DNM1Q05193 864 aaKnown RBP20.4■□□□□ 0.86
PDX1-201ENST00000381033 BRF1Q92994 677 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 KCNG1Q9UIX4 513 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 FIBPO43427 364 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 CDC37L1Q7L3B6 337 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 MYH3P11055 1940 aa20.39■□□□□ 0.85
PDX1-201ENST00000381033 PDE8BO95263 885 aa20.38■□□□□ 0.85
PDX1-201ENST00000381033 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 NGLY1Q96IV0 654 aa20.38■□□□□ 0.85
PDX1-201ENST00000381033 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDX1-201ENST00000381033 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 MYO5AQ9Y4I1 1855 aaKnown RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
PDX1-201ENST00000381033 TOM1O60784 492 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 ZNF445P59923 1031 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 RBSNQ9H1K0 784 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 E7EWF7 191 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 DSCC1Q9BVC3 393 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 UBAP1LF5GYI3 381 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 KRT32Q14532 448 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDX1-201ENST00000381033 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 LAMA4Q16363 1823 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 CCDC102BQ68D86 513 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PIH1D3Q9NQM4 214 aaKnown RBP20.36■□□□□ 0.85
PDX1-201ENST00000381033 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 UTP14AQ9BVJ6 771 aaKnown RBP20.35■□□□□ 0.85
PDX1-201ENST00000381033 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 NKX2-3Q8TAU0 364 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 COL4A1P02462 1669 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 FGAP02671 866 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 FOSBP53539 338 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 SCRN1Q12765 414 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 NASPP49321 788 aaPredicted RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 CCT2P78371 535 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 NCOA5Q9HCD5 579 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms