RNA–Protein interactions for RNA: ENST00000380774.7

RAD17-208, Transcript of RAD17 checkpoint clamp loader component, human

APPRIS P1 TSL 1 (best) BASIC

Gene RAD17, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD17-208	ENST00000380774	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.9	□□□□□ -1.63
RAD17-208	ENST00000380774	CEMIP	Q8WUJ3	1361 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	ABCC4	O15439	1325 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	CARNS1	A5YM72	827 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	BTBD11	A6QL63	1104 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	WNT7B	P56706	349 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	TEF	Q10587	303 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	SLC39A6	Q13433	755 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	SLC4A10	Q6U841	1118 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	SIRT2	Q8IXJ6	389 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	PLPP7	Q8NBV4	271 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	PHAX	Q9H814	394 aa	Known RBP	4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	PRDM11	Q9NQV5	511 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	STRN4	Q9NRL3	753 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	VIRMA	Q69YN4	1812 aa	Known RBP	4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	RGS12	O14924	1447 aa		4.89	□□□□□ -1.63
RAD17-208	ENST00000380774	CYP27B1	O15528	508 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	EIF4A1	P60842	406 aa	Known RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PRR20E	P86478	221 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PRR20C	P86479	221 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PRR20D	P86480	221 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PRR20B	P86481	221 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PRR20A	P86496	221 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	AAMP	Q13685	434 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	NCOA4	Q13772	614 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	AMOT	Q4VCS5	1084 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	TAF7L	Q5H9L4	462 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	C1orf141	Q5JVX7	400 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	RC3H1	Q5TC82	1133 aa	Known RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	PLEKHM2	Q8IWE5	1019 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	RAPGEF4	Q8WZA2	1011 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	SLC10A4	Q96EP9	437 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	API5	Q9BZZ5	524 aa	Known RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	USP35	Q9P2H5	1018 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	STK17A	Q9UEE5	414 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	CRYBG1	Q9Y4K1	1723 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	CAMTA1	Q9Y6Y1	1673 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	MEGF6	O75095	1541 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	NCAPD2	Q15021	1401 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	ESPN	B1AK53	854 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	TAT	P17735	454 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	VARS	P26640	1264 aa	Known RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	LARP1	Q6PKG0	1096 aa	Known RBP	4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	VRTN	Q9H8Y1	702 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	LRRC37A3	O60309	1634 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	LTBP4	Q8N2S1	1624 aa		4.88	□□□□□ -1.63
RAD17-208	ENST00000380774	FAM187A	A6NFU0	413 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	ST8SIA5	O15466	376 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	SIAH2	O43255	324 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	ATG7	O95352	703 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	CD2BP2	O95400	341 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	PHKG2	P15735	406 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	HDAC1	Q13547	482 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	C8orf34	Q49A92	452 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	CCDC30	Q5VVM6	783 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	SPRYD7	Q5W111	196 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	INTS3	Q68E01	1043 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	TOM1L2	Q6ZVM7	507 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	ZNF592	Q92610	1267 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	MEIS3	Q99687	375 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	MKRN1	Q9UHC7	482 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	LMO7	Q8WWI1	1683 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	FAM208A	Q9UK61	1670 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	CPD	O75976	1380 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	LOC100996750	A0A140TA64	210 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	EVA1C	P58658	441 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	PIP4K2B	P78356	416 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	FKBP5	Q13451	457 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	PROSER3	Q2NL68	480 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	CRTC2	Q53ET0	693 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	ZNF598	Q86UK7	904 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	EHBP1	Q8NDI1	1231 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	DDX54	Q8TDD1	881 aa	Known RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	KCTD15	Q96SI1	283 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	STK31	Q9BXU1	1019 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	KRTAP4-6	Q9BYQ5	205 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	CHPF2	Q9P2E5	772 aa		4.87	□□□□□ -1.63
RAD17-208	ENST00000380774	PTPRC	P08575	1304 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	WFS1	O76024	890 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	GRM5	P41594	1212 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	PIP4K2A	P48426	406 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	MAP7D1	Q3KQU3	841 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	ANKRD45	Q5TZF3	282 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	ILDR2	Q71H61	639 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	SMC5	Q8IY18	1101 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	TRAIP	Q9BWF2	469 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	LNPK	Q9C0E8	428 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	BABAM1	Q9NWV8	329 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	BTG4	Q9NY30	223 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	ZMIZ1	Q9ULJ6	1067 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	SPG7	Q9UQ90	795 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	TLL2	Q9Y6L7	1015 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	KDM6A	O15550	1401 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	WDR17	Q8IZU2	1322 aa		4.86	□□□□□ -1.63
RAD17-208	ENST00000380774	RAB15	P59190	212 aa		4.85	□□□□□ -1.63
RAD17-208	ENST00000380774	ARID5B	Q14865	1188 aa		4.85	□□□□□ -1.63
RAD17-208	ENST00000380774	NBPF20	Q3BBV1	942 aa		4.85	□□□□□ -1.63
RAD17-208	ENST00000380774	INTS6L	Q5JSJ4	861 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms